Glycine max (soybean): 100782017
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Entry
100782017 CDS
T01710
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100782017
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
100782017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Ssol_1539-like_2nd
CBM9_2
Motif
Other DBs
NCBI-GeneID:
100782017
NCBI-ProteinID:
XP_006601868
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Position
18:2463..40003
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AA seq
1952 aa
AA seq
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MWTNVFKIGSMHQISWFQFLPHEPDLNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLS
TWTNSFVGPWDPSQGLHNPDEKIKLWLFLRGRHSSVVETAQTAVSGLRVVASGLWLAPGD
SEEVAAALSQALRNCIERALLGLYYMRFGDVFSKFHQFQREEIFRRGQPAVEFVFAATEE
AIFIHVIVSSKHIRMLSTADLEKVLKHSMESTYRLPVIVSPHGIRGSLTGCSPSDLVKQS
YFSSSTKFRVSNGIIGLPYHVSQGVGCQLRGQNCYVEVSLGFPRSGTDNTLQPNKNSVRN
LPKLHVAESPVVGRSDHKGPPDHLLDYDKTFLYPAEAVLVPVLQTSLARSSLRRFWLQNW
MGPSLPGSSSFIHCAGNVDCTEDPWTEINGTRTQSSYDSSSNSNNSSISSLSASSSDSDY
KTTGPSELEADADSLTCRQSMVSSADQLDSDGPKLGSKRSRTGVTELLSTATNIPVQDAY
MSDFGSMEVNNSAITGVGNEPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPF
GEPPGTAESQALMLSAPDCGDVNSSPGGVIDVPDQILLPVGFASFESFNPPPSTSIEECL
NKSQDNLNNSMSLGPTNQNQLLYTREFDHIMKAEAMMTFAPEFGAVDTPTCEFSTTLFRS
PYFPKSRKAKSSTSSSSNYLYGAAPPTSTCTEGSEGKNGKSVNTKTGSGKHDASTMSLHS
KYYYTFVESRKEKNDKNPATCNDNSITKSEGMPPLSNIGSNAIVKSAIRKTTDCTHEAEQ
FLLSAKTLLATDITCIMLQASMCRLRHILLSSGNLMPAGLSRSTGVSFLNQLPSDPSMTT
DNISGKYDVKKKENIPIRIAGDIDGGMLDGHLNAPVGVWRTLGASKVVKPSNSPNMEVVP
SFPHNSFNEEGILSYGQRKPLQELLDGIALLVQQAISFVDLALDVDCGDGPYGLLAMQEQ
WRRGFCCGPSMVHAGCGGSLASSHSLDIAGLELVDPLSADVHASTVISLLQSDIKTALKS
AFPNLEGPLSVTDWCKGRNQLIDTGSVVDGVSAESNINECRDSSEPMSPSQSSVGGSSSI
KVSNMMDKVDETSQRRSGQDLCSTESEQQTCSRLKPTLIALPFPSILVGYQDDWLKTSAN
SLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQGLG
NQIEIESAKLSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKA
LRGLKIGSCFSTNPSEGSNSSCLVIYVVCPFPDPTAILQTVIESSVAIGSVVQQSDRERR
SSLHSQVVKALSGLATVDEASASNILVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVIL
KETSFTVYSKARRISRGISSDFAQSAFSSRSHSGLTQMPSPISGMWKDCVGPRMAGHSLP
REGDIDASLRPGTWDNSWQPTRTGGLSCDPSRTGDNFLHDEIRYMFEPLFILAEPGSLEN
GISVIGSPTSESSKALADDSSGNYVQSTSTAGSVESASSTDASGSDPKTPPSLHCCYGWT
EDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFVQILQQGCLILQSCDPGLA
KPRDFVIARIGGFYELEYLEWQKAIYSVGVSEMKRWPLQLRKSMSDGMSATSNGSSLQQS
DMSLIPERTLPSSPSPLYSPHTKSPGFMKGSLGQPTARKQLIGGHSMVDNSRGLLHWAQS
ISFVAVSMDHTLQLVLPADSSTPGYIEGFTPVKSLGSTSSAYILIPSPSMRFLPTTVLQL
PTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRANQKEEWPSVLSVSLIDY
YGGTNIPQEKIVRGINKQGGRSLSWEAKDFEIETHLVLESLAAELHALSWMTVSPTYLER
RTALPFHCDMVLRLRRLLHFADKELSKQSEKS
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatgttttcaaaatcggaagtatgcatcagatatcttggtttcagtttctt
cctcatgaacctgacctgaaccctctacctgacaaaagtgttaaagtggaccaaaaggat
gctgcaatgttactggtgctttcatcacatctgcaacttcagaaggaggggtttctcagc
acatggaccaattcctttgttggaccttgggatccatcccagggattgcataatccagat
gaaaagattaagctgtggctttttcttcgggggcgtcattcatcagttgttgagactgct
cagacagcagtatctggattaagagttgttgcttctgggctttggttggctcctggggat
tcagaagaggttgcagctgctctctctcaggctttaaggaattgtatagaaagagctttg
cttgggctttattacatgagatttggagatgtattttcaaagtttcatcaatttcaaaga
gaagaaattttcagaagaggacagcctgcagttgaatttgtctttgctgcaactgaggag
gcaatcttcatacatgtcatagtatcctcaaagcatatccgaatgctttccacagctgat
ctggaaaaagtattaaaacattctatggagtcgacatatagacttccagtaattgtttct
ccgcatggaattcgtggcagcttgactggttgttctcctagtgatcttgtcaagcaaagc
tatttcagcagttctaccaaatttagggtgtccaatggaattataggtctcccatatcat
gtttcccagggtgttggttgccagctgagggggcagaattgttatgttgaagtaagtctt
ggcttccctagatctggaactgacaacacgttgcagccaaacaaaaatagtgtcaggaat
ttacccaaacttcatgttgctgaatctcctgttgtgggacgaagtgatcacaagggacca
ccagatcatttgttggattacgataaaacgtttctctatccagctgaggcagtgcttgtg
ccagtcttacaaacatcattagcaaggtcttccttgagaagattttggctgcagaattgg
atgggaccatccctgcctggttcctcttcctttattcactgtgctggtaatgtggattgt
actgaagatccttggactgaaatcaatggaacccgcacacaaagtagttatgatagtagt
agcaatagcaataatagcagtattagtagcttaagtgccagctctagtgatagtgattac
aagactacaggaccaagtgaactagaggcagatgctgattctttgacgtgtagacagtct
atggtatcttctgctgatcagttggacagtgatggccccaaattgggctctaagcggtct
cgaacaggggtgacagagttgttaagtacagctacaaacattcctgtgcaagatgcttac
atgtctgattttggttccatggaagtgaacaattcagccattacaggagtaggaaatgag
ccaattgggtcttactgggactgggatgatgatgatagaggcatggaaatggatattcaa
gcccttctatcagagtttggtgattttggtgacttctttgaaaatgatgttttacctttt
ggagagcccccaggaactgcagaatctcaggcactcatgctttctgccccggattgtgga
gatgtcaacagcagtccaggtggtgtgatagatgttccagatcaaatacttttgcctgtt
ggctttgcttcctttgagagctttaacccccctccttcaacatccatagaagaatgtctt
aacaaaagtcaagataacttgaataactccatgtctttgggtccaaccaatcaaaatcaa
ctgttgtatacaagggagtttgatcatataatgaaagctgaagcaatgatgacattcgct
cctgaatttggagctgttgatacccctacttgtgagttctccacaacattattcagaagc
ccatattttccgaaatctcgaaaagcaaagagttcaacttcaagttcaagcaattactta
tatggtgcagcaccgcccacttctacttgcactgaaggatcagaggggaagaatggaaag
tccgtcaacacaaaaacaggttctggaaaacatgatgctagtactatgagtctccactca
aaatattactacacttttgtggaaagtaggaaagaaaaaaatgataaaaatcctgccact
tgcaatgataacagcataactaaatctgaggggatgccaccactctcaaacattggttct
aatgctattgtcaagtctgccataaggaagacaactgattgcacacatgaagcagagcag
ttccttctatctgcaaaaactttgttggcaactgatatcacatgtattatgttgcaagct
tccatgtgcaggttacgccatattctcttgtcttcaggtaacctaatgcctgctggtttg
agtaggtcaactggggtttcatttttgaatcagcttcctagtgatccaagtatgacaaca
gacaacatatctggcaagtatgatgttaagaagaaagaaaatataccaattagaattgca
ggtgatattgatggaggaatgcttgatgggcaccttaatgcccctgttggtgtttggcgc
acattaggagcttccaaagttgtaaaaccttcaaattcacctaacatggaagttgttcct
tcctttcctcataattctttcaatgaagaaggtatcctttcttatggtcaaaggaaacca
cttcaggagcttcttgatgggatagcattacttgtccaacaagctatttcctttgttgat
ctggccttggatgtggattgtggtgatggtccttatggtttgcttgcaatgcaagaacag
tggaggcgtggattttgttgtgggccttccatggtccatgctggctgtgggggaagtctt
gcctcttctcattcattggacattgctggcttggagttagtggatccactttctgctgat
gttcatgcatccactgtcatcagtttgctgcagtctgacataaaaacagctttgaaatct
gcttttcccaatttggaagggccattatctgtaactgattggtgcaaaggacgcaatcaa
ttgattgatactggaagcgtagttgatggagtttctgctgaatccaacattaatgaatgt
agggattcttcagaaccaatgagtccatctcaatcatctgttggtggatcttccagtatt
aaggtttccaacatgatggataaggtggatgagacttctcaaaggagatctggccaagat
ttatgcagcacagagtcagagcagcaaacatgttcccggctaaaacctactctcattgct
cttccgtttccttctatacttgtagggtatcaggatgattggctcaagacatcagcaaac
tctttgcagcactgggagaaggctcctctagagccctatgctctacagaaacctattacg
tatcatgttgtatgtcccgacattgatccccttacttctgctgctgctgatttttttcaa
caactaggaacagtgtatgagacatgcaagctaggtactcattcacctcaaggcttgggg
aatcagatagagatagagtctgcaaagttgtcatcttgtggttttgttttacttgattgc
ccccaatcaatgaagattgagagcagcaatgcatctcttgttggttcagtaagtgattat
tttttatctttatctaatggttgggacctgactagttatctcaagtctctttcaaaggca
cttagaggtttgaaaattggctcttgcttttctacaaaccccagcgaaggaagtaacagc
tcatgcttggtaatctatgtggtgtgcccatttcctgatcccactgcaattttgcaaact
gtaattgagtcttctgttgccattggatcggttgtccaacagtcggatagagagaggaga
tctagcttgcatagtcaggttgtgaaggcattaagtggcttggccactgtcgatgaagct
tcagcgtctaatatccttgtgctttctgggtttagtattccaaaattggtcttgcagata
gttacagtggatgccattttcagagtcacaagcccatctgttagtgagcttgtcatttta
aaagagacttcctttactgtatacagcaaggctcgtcgcatttcacgtggaatctctagt
gattttgctcaatctgcattttctagtagatctcattctggtttgacacaaatgccttct
cccatctctgggatgtggaaagactgtgttggtcctcgaatggcaggacattctcttcca
agagagggtgacattgatgctagcttgaggcctggtacttgggataattcttggcaacca
acaaggactggggggttaagctgtgatccaagtagaactggggataattttcttcatgat
gaaattcgttacatgtttgaacccctttttattctcgcagaaccaggttctcttgaaaat
ggtatttcagttattggtagtcccacttcagaatcttccaaggcattggcagatgacagt
agtggtaactatgtacagagtacaagtacagcaggaagtgtggagtctgcttcaagcact
gatgcatctgggtccgatccaaagactcctccaagcctacattgttgctatggatggact
gaggactggcgttggctcgtgtgcatctggacagactcaaggggagaattgctggactgc
aatattttcccctttggtggaataagcagcaggcaggatacaaagggtctgcagtgccta
tttgttcaaattcttcaacaaggttgtctgatacttcaatcttgtgatcctggccttgca
aagcctcgagattttgtgatagcacgcattggaggtttttatgagctcgagtaccttgag
tggcagaaagccatttattcagttggtgtatctgagatgaagagatggcctctgcaattg
cggaaatctatgtctgatgggatgtctgcaactagtaatggttcttctttgcaacaatca
gatatgagtttgatcccagaaagaactcttccttcctcaccgagtcctttgtacagccct
cataccaaatcccctggttttatgaaaggcagtttagggcaacctactgcaagaaagcaa
cttatcggtggacattctatggttgacaattctaggggtttgcttcattgggcgcaaagc
attagttttgttgcagtttccatggaccatactttacaactagttctcccagcagattca
tcaactcctggttacatagaaggtttcactccagttaagtctcttggttctacgtcttct
gcatatattctaattccttctcctagcatgcggttccttcctacaacagttcttcaactc
ccaacatgcctcacagcagagtcgccaccactagctcatctgcttcacagcaagggttct
gctcttcctctctctactggatttgtggtttcaaaagctgtaccttccatgaggaaggac
tatagagccaaccaaaaagaagaatggccctctgtactttcagtgagcctcattgattat
tatggaggtactaacatcccccaagagaagattgtccgaggaattaacaagcaaggtggt
agaagtttaagctgggaagctaaagattttgaaattgagacccacttggttctggagtct
cttgcagcagagcttcatgccttgtcatggatgacagtgagccccacatacttagagcgg
cgaacagcacttcctttccactgtgacatggttctaagactaagaagacttcttcacttt
gctgataaagagctctccaagcagtccgagaaatcttga
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