Glycine max (soybean): 100782390
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Entry
100782390 CDS
T01710
Name
(RefSeq) uncharacterized protein LOC100782390
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Module
gmx_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100782390
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
100782390
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF4218
Motif
Other DBs
NCBI-GeneID:
100782390
NCBI-ProteinID:
XP_040869866
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Position
3:complement(29722399..29734764)
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AA seq
694 aa
AA seq
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MKILKGYTKNLYRPEASFVERYIVEEAIEFCSKYIGKEKPVGLSESRDEERVGGEANDYT
TSLLLLLLLLMQHHIPLYLEADKKSHRLRSLLTRPVGAERPMVHVDPTTGKADADKDSVD
DTVCEKIRWRSQASQGSFVLHGHQDVLTAAIGRPEHPGRVRAVGDGVTIKQYFGPAPRTS
RTSSCNHKDSHCLLSQRLVLQLLVSIKESYVYPSSNDPYTGDSEKYGLYVEENLPRLVAL
GRLYEGSTTVHNMSLCHDQLKVGVEEVRDVDALIPIPTQKGVLGPTKPADRPDHDVDDPL
YLMTLTIPQLFLKPLQVMWDAIVFGMFNDDFPLLIMTCVLIIGFVSPCLCLRSMVGTKNT
FYNVMDFGAHGNGKSDDSHAFSSAWQHTCGTQGTSTLVIPPKGVFLVTNITLKGPCKARS
LDPLILISNLNGLTIDGSGGQIDGFGSTWWKCRSCLRPRVISFVSCNDLTVRKLSISNSP
RAHITIDGCNGAIFSNINIHAPRNSPNTDGFDIAFSKNILIEDCTIATGDDCIAINGGSS
YINATGIACGPGHGISIGSLGKHNAHETVEEIYVYNCSFTKTTNGARIKTVPGGTGYAKR
ITFEKIKLIQTRNPIILDQFYHSVHLTVTYRGFQGTSANDKAINLDCGPSGCFNIVLDQI
DIVSSDTSKPAHCSCNNAHGTTTSTVPNCSCLLK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttaaaagggtataccaaaaatctataccgtccggaagcatcttttgtggaa
aggtacattgtagaagaagccattgaattttgttcaaagtacattggaaaagaaaaacct
gttgggctttccgagtctcgggatgaagaaagagtgggaggtgaggcaaatgactacacc
accagtctcctcctcctcctcctcctactgatgcagcatcacattcccctctaccttgaa
gcggacaagaaaagccacaggctaagatcattgctgactagaccagttggggcagagaga
cccatggtccatgtggatcctacaactgggaaagccgatgccgacaaggacagtgtcgat
gacactgtatgcgaaaagattcgttggaggagtcaggcctcacagggttcctttgtcctc
catggacatcaggatgtactgactgctgccattgggcgaccagaacaccctggtcgtgtg
cgtgctgttggagacggtgtcacaatcaaacaatactttggaccggctccaaggacctcc
cgcacttcttcatgcaatcataaggactcacactgcctcttgagccagaggttggtcctt
cagctgctcgtgtccataaaggagagttatgtttatccctcaagcaacgacccatacacg
ggtgactcagagaaatacgggttgtacgttgaagaaaaccttccccgcctggttgcccta
ggaagactttatgagggatccacaaccgttcacaacatgtctttgtgccatgatcaactc
aaggttggtgttgaggaagttagagatgtagatgctctcattcctatacccactcaaaag
ggagttctgggaccaacgaaacctgcagataggccggatcatgatgtcgatgatcctcta
tatctaatgacattgaccatcccacaactttttctaaagccgttgcaggttatgtgggat
gctatcgtgtttgggatgtttaatgacgacttccccttgctaataatgacttgtgttttg
attattggttttgtttcaccatgtttatgtttgaggtcgatggttggaaccaaaaacaca
ttttataatgtgatggactttggtgctcatggcaatgggaaatctgatgattctcatgca
ttttcaagcgcatggcaacacacatgtggaacacaagggacatcaactctagttatacca
ccaaaaggagtattcttggtgacgaacataaccctgaaaggaccttgcaaggccagaagt
ctggatcctttgattttgatctcaaacctaaacggtctcacgattgatggaagcggagga
caaatcgatggcttcggttctacttggtggaaatgcagaagttgtcttcgaccaagggtc
attagttttgtatcttgcaatgatcttactgttcgtaaactgagcatctccaatagtcca
agagctcacataacgattgatggttgtaacggtgccatattctctaatatcaatattcat
gctcctaggaacagccccaacactgatggatttgatattgctttttccaaaaatatcttg
atcgaagattgtactatagcaactggtgatgattgtattgccatcaatggaggctcctca
tacatcaatgctactggaattgcttgtggtcctggccatggaataagcattggcagcctg
ggtaaacacaacgctcatgaaacagtggaagaaatttatgtatacaattgcagtttcacc
aaaacaacaaatggagcaagaatcaagacagttccgggtggaacaggttatgcaaaaaga
atcacgtttgagaaaatcaaattaatacagactcgcaacccaataattttagaccaattc
tatcatagtgttcacttaacggtgacataccgtgggtttcaaggaacatctgcgaatgac
aaagctattaacttagattgtggcccatcaggttgttttaacattgtattggatcaaatt
gacattgtctcttctgatacatcaaaaccggctcattgttcatgcaataatgcccatgga
acaactacatctactgttccaaattgctcttgtctattgaaatga
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