Glycine max (soybean): 100782869
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Entry
100782869 CDS
T01710
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
gmx03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100782869
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100782869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100782869
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100782869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100782869
NCBI-ProteinID:
XP_040873737
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Position
8:complement(44104655..44110201)
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AA seq
703 aa
AA seq
DB search
MDEAEGGYGESGDPMDQFHRNEAISAVADDGFLGEEEDDDYEDLYNDVNVGEGFLQSLRK
NDDSGFRNDDVEEKKPPPPPPAVPDATGVSIPGDGGGGEGVGGGGSGVVESRVSGSVDGF
QNQGFRGNDVGSKGGIRVELGNQSGKLTEIEDQGGNDGAAVQGIGQQPPGVVVGSVGNEG
LVRQCQGGGGGSGGGGNVIRVGGNGVGNSVSAVSGVNTGGVGGGGGGGAAGGSGGTILFV
GDLHWWTTDAELETELSKYGPVKEVKFFDEKASGKSKGYCQVEFFDPSAATACKEGMNGH
VFNGRPCVVAFASPFTVKKMGEAQINRNQQMNPSAVPQGRRGPADAGAKPGGSNISTVGN
YQGGEGNRGYGRGGGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGHGGNGFGQGMGG
TPPMLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAP
HVNPAFFGRGMPVNGMGMMPGSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAA
SDHQYGEVSHDRAGWPMREKDRGSERDWSGTSERRYRDDRDQGYERDAPKEEDMGHDHEW
SERRHRDDRETGRERSRDRDRERSRDRDRDRERDHRERDRHREDRDKYADHHRYRDREAE
HDDEWERGRSSRMHSKSRLSQEEEHHSRPRDADYGKRRRLTSE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggccgagggagggtacggtgagagcggcgatcccatggatcagttccaccgt
aacgaagctatatccgccgtcgccgacgacggtttcttgggcgaggaagaagacgacgat
tacgaggatctttacaacgacgtcaacgtcggcgaagggtttcttcaatcgttgcgcaag
aacgacgattcggggtttcgaaacgacgacgtcgaggaaaagaagcctccgccgccgccg
ccggcggttccggatgccactggggtctcgataccgggtgacggtggcggtggagagggt
gtcggtggtggtggaagcggggttgtggaatctagggtttctgggagtgttgatgggttt
cagaatcaagggtttagagggaacgatgtgggttccaaaggcgggattagggttgaatta
gggaaccaatctgggaaactgactgaaattgaggatcagggtgggaatgatggtgctgca
gtgcaggggattgggcagcaaccacctggtgtggttgttgggagtgtgggaaatgagggt
ttggtgagacaatgtcaaggtggtggtggtggtagtggaggaggagggaatgttattagg
gttggtggaaatggtgttgggaacagtgtgagtgctgttagtggtgttaatactggagga
gttggaggtggtggtggtggtggtgctgctggtggttctggtggtactatactgtttgtg
ggtgatttgcattggtggactactgatgctgagcttgaaactgagcttagtaagtatggg
cctgttaaggaggtgaagtttttcgatgagaaggcgagtgggaagtcgaaggggtattgt
caggttgagttttttgacccttctgctgccactgcttgtaaggaagggatgaatgggcat
gtttttaatgggaggccgtgtgttgttgcgtttgcatcgccttttacagttaagaaaatg
ggggaggctcagataaataggaatcagcagatgaacccttctgctgttcctcagggaagg
agggggcctgctgatgcaggggctaagcctggcgggagtaatatttcgacagttggtaat
taccaaggtggagaagggaatagaggttatggaagaggaggaggtaactgggggagaggg
aacaatcctggtatggggaatagagggcctgttaatccaatgaggaatagaggtggtggg
atgggtggtagaggtataatgggccatggtggaaacggatttggacagggtatgggtggt
acccctccaatgttgcatcctcagtcaatgatgaatcagggttttgatcctgcatttggt
ggtcccatgggtagaatgggtggctatggaggctttcccggtgctccgacgcctccattt
tctgggattttgccttcattccctggtgttggaggtgttggtttgcctggagtggcacct
catgttaatccagcctttttcggaagagggatgcctgttaatggtatggggatgatgccc
ggatcaggcatggatggtcctaatatgggaatgtggtcagatccaaatatgggtggatgg
ggtggtgaagagcctggtggtgggaaggctggagagtccagttatggggaggaagctgca
tctgaccatcagtatggtgaggtgagtcatgatagagctgggtggcctatgagggagaaa
gatagaggctcggaaagagactggtctggtacttctgagagaaggtacagagatgataga
gatcaaggatatgaaagagatgcacctaaagaagaagacatgggccatgaccatgaatgg
tctgaaagaaggcatcgtgatgatagagaaacgggccgagaacgatctcgtgatcgtgac
cgtgaacgatctcgagaccgtgatcgtgaccgcgaaagggatcaccgtgagcgtgacagg
cacagagaagatagggacaagtatgcagatcatcataggtacagagaccgggaggcagag
catgatgatgagtgggagaggggacgatcatcaaggatgcacagcaagtcacgattatca
caagaggaagaacaccattctaggccaagagatgctgattatgggaagaggcggaggctt
acctctgaataa
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integrated database retrieval system
