Glycine max (soybean): 100783336
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Entry
100783336 CDS
T01710
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100783336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmx04121
]
100783336
Enzymes [BR:
gmx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100783336
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
HECT type E3
100783336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
ARM_ARMC5
HEAT_EZ
HEAT_2
Motif
Other DBs
NCBI-GeneID:
100783336
NCBI-ProteinID:
XP_003540876
LinkDB
All DBs
Position
12:2441271..2452192
Genome browser
AA seq
1877 aa
AA seq
DB search
METRSRKRAEASSAAPSSPSSGPTTRSSKRARLSSSSSASAAAAAASVSSVNTRSRSSRT
KEPLPPKNPPPMDSANESSGSRRDRRNKDNSDKGKEKEHDVRIRDRDADRGLALNMDGGG
DDDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSASSSHQSGRLKKI
LFGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLA
ARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACLR
AGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDSKVL
EHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISNSSSGGGQASLSTPTYTGLIRL
LSTCASGSPLGAKTLLLLGISGILKDILSGSGVSSKASVSPALSRPPEQIFEIVNLTNEL
LPPLPHGTISLPIISNMFLKGPIVKKSPAGSSGKQEDTNGNVPEISAREKLLNDQPELLK
QFAMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISSFLAGVLA
WKDPHVLLPALKIAEILMEKLPGTFSKMFIREGVVHAVDQLILTGNSTNISTQASSAEKD
NDSISGASSRSRRYRRRSGNSNPDGNPLDDLKTPVSVNVGSPPNSVDMPTVNSSIRLSVS
TAAKAFKDKYFPSDPGAAEVGITDDLLHLKNLCMKLNAGADEQRTNGKGKSKTSGFGLEE
YLIGIIADMLKELGKGDGVSTFEFIGSGVVAALLNYFSCGYFSKDRPLETHLPKLRQQAL
TRFKLFIAVALPSTTEDGTVAPMTVLVQKLQNALSSLERFPVVLSHSSRSSSGSARLSSG
LSALSQPFKLRLCRAQGERSLRDYSSNVVLVDPLASLAAIEEFVWPRIQRSELGQKSTVP
AGNSESGTTPTGAGVSSPTTHRHSTRSRSSVNIGDTSRKEISQDKSTSSSKGKGKAVLKP
AQEEARGPQTRNATRRREALDKDAQIKPVNGDSTSEDEDLDISPVEIDEALVIEDDDISD
DEDDDHDDVLRDDSLPVCSPDKVHDVKLGDIVEESNVAPATSDGGQTNAASGSSSKAGTV
RGSDSADFRSGYTSSSRGAMSFAAAAMAGLGSANSRGIRGGRDRLGRPLFGSSNDPPKLI
FTAGGKQLNRHLTIYQAIQRQLVLDEDDEERFAGSSDYVSSDGSRLWGDIYTITYQRAEN
QTDRTPPGGSTSNASKSGKSGSVLNSSSEDKLNQTSVLDSILQGELPCELEKSNPTYNIL
ALLRVLEGLNQLASRLRAQVVTDSFAEGKILDLVELSFTSGARVPTEEFISSKLTPKLAR
QIQDALALCSGSLPSWCYQLSKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGH
GSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMELYSSQKAVLEVEYFGEVGTGLGPTLE
FYTLLSHDLQKVVLQMWRSGSSEKYQMEIDGDEKKMKNSEGSFVGDGELVQAPLGLFPRP
WPANADASEGTQIFKVIEYFRLLGRVMAKALQDGRLLDLPLSVAFYKLVLGQELDLHDIL
FIDAELGKTLQELNALVCRKCFIESIGGSYTDTFANLHFRGAPIEDLCLDFTLPGYPEYI
LKPGDEIVDINNLEEYISMVVEATVKTGIMRQMEAFRAGFNQVFDISSLQIFSPQELDYL
LCGRRELWKTETLADHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPRLPP
GGLAVLNPKLTIVRKLSSSAANASSNGNGPSELADDDLPSVMTCANYLKLPPYSTKEIMY
KKLLYAISEGQGSFDLS
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggcttcctcagctgccccttcatccccttcc
tctggtcccaccactcgttccagcaagcgtgcacgcctctcttcttcttcctccgcttcc
gccgccgctgccgccgcatccgtttcttccgtgaacactcgctcccgttcatcccggact
aaggaacccttgccccctaagaatcctcctcccatggactctgccaatgaatcctctggc
tcccgccgcgatcgccgcaacaaagacaactccgacaaggggaaggagaaagagcatgat
gttaggattagggacagggatgctgacagagggctggcattgaacatggatggtggcgga
gacgatgatgacaatgacagcgaaggcggtgtggggattttgcatcaaaacttgacctct
gcgagtagtgcacttcaggggcttcttcggaaacttggtgctggtttggatgatctgctt
ccatcatcggctatgggttctgcgtcttcctctcaccagagtgggaggctgaaaaagatc
ctcttcggattgcgggcggatggcgaagaagggcggcaggttgaagcattgacacagctc
tgtgagatgctttcgattgggactgaagagtcacttagtacattctctgttgattcgttt
gttcccgtgcttgtggggttgttgaatcacgagagcaaccctgacatcatgcttcttgct
gccagagcattgacccatctctgtgatgtgctcccttcatcttgtgctgctgttgtgcat
tatggtgccgtgtcaatcttttgtgcgaggttgctcaccatagaatacatggacctggct
gagcagtcccttcaagctctgaagaagatatctcaggagcatcccactgcctgcctacga
gcaggtgctcttatggccgtgctttcctatttggacttcttttcaacaggagttcagcgg
gttgcattgtctactgctgcaaatatgtgcaaaaagcttccttcagatgcagctgatttt
gtgatggaagctgttcctcttctgacaaaccttcttcagtaccatgattccaaggttctg
gagcacgcctctgtttgtttgactcgaatagctgaagcttttgcgtcatctccagacaaa
ttagatgaattgtgcaaccatggacttgtaacacaagctgcctccctcatttctaacagc
agttctgggggtggtcaggcttctctcagcacgccgacatatactggtttaatccgactt
ctttcaacttgtgcgagtggatctcctcttggagctaaaaccttactacttcttggaatt
agtggtattcttaaagatattctatctggttctggagtttcttctaaggcctctgtttct
cctgcattaagtaggccgccagaacagatatttgagattgtaaacctcacgaatgagctt
ctgcctccattgccacatggaacaatttctctccctatcatctccaacatgtttttgaaa
gggcccattgtaaagaagtctcctgctggtagctctggaaaacaagaagacacaaatgga
aatgttcctgagatatcggctcgtgagaaactattaaatgatcagcctgaactacttaag
caatttgcgatggatctccttccagttttaatacagatatatggttctagtgtcaatggt
cctgttcggcacaaatgcctttctgtcattggaaaattgatgtatttcagcacagcagag
atgatccagtctttgttgagtgtgacaaatatatcaagtttcttagctggcgtcttagca
tggaaagatccacatgttttgcttcctgccttgaaaattgctgaaattcttatggaaaag
cttcctgggacattctccaagatgttcattagagaaggtgttgtgcatgcagtggaccaa
cttattttaactggaaattcgaccaatatctctacacaggcatcttctgccgagaaggat
aatgattctatatctggagcatcatctcgctctaggcgttatcggcgacgcagtgggaat
tccaatcctgatggaaatcctttggacgatttgaaaactccagtttcagtaaatgttggt
tcacctcctaattctgtggatatgccaacagtaaattccagtattcggttatctgttagt
acagctgccaaagcttttaaagataagtattttccttcagatcctggggctgctgaagtg
ggtattactgatgatcttttgcatctgaaaaatctttgcatgaagttaaatgctggtgct
gatgaacaaaggaccaatggaaaggggaaatctaaaacttctggatttggtctggaagag
tatttaattgggatcatagctgacatgctaaaggaacttggcaaaggagatggggtatct
acttttgaattcattggtagtggtgttgttgcagctctgttgaattatttttcttgtggg
tatttctctaaagatcgaccattagaaacccaccttcccaagcttcgccaacaagcactt
acaaggtttaagttatttatagctgttgcactaccttctactactgaagatgggactgtg
gctcctatgactgtcttggtccagaagcttcaaaatgccttgtcctccttggagcgtttc
cctgttgtgctgagtcattcatctaggtcatctagtgggagtgcacgcctctcctctgga
ctaagtgcattatctcagcccttcaagttgcggctttgtcgagcccagggtgaaaggtca
cttagggattattcatccaatgttgtactggttgatccattagcaagtttagcagcaatt
gaggaatttgtttggcctcgtatccaacgaagtgaattgggtcagaagtccactgtacct
gctgggaattctgaatctgggacaactcctacaggagctggtgtatcctctccaactacc
catcgccattctactagatccagatcatctgttaatataggtgatacatctagaaaggaa
ataagtcaagataaaagcacaagctcttccaagggtaagggaaaagctgtattaaagcct
gcacaagaggaggcaagaggacctcagaccagaaatgctactcgcagaagagaagctctt
gataaagatgctcaaataaagcctgtaaacggtgactctacttctgaggatgaagatttg
gatatatcccctgttgagattgatgaggcattggtgattgaagatgatgatatttctgat
gatgaagatgatgaccatgatgatgtactgagggatgattctcttcctgtttgttcacct
gacaaagtacatgatgtgaaattgggcgacatagtggaggagagtaatgttgctcctgca
actagtgatggtggccagactaatgctgcctcaggttctagtagcaaagctggtacagtc
aggggatcagactctgctgattttaggagtggctatacctcaagctcaagaggtgcaatg
tcatttgctgctgctgctatggctggacttggatctgccaatagcagaggtatcaggggt
ggaagagatcgactagggcgtccattgtttggtagttctaatgatcctccaaagttgata
tttactgctggtgggaagcagcttaataggcatttgactatttatcaggcaattcaaagg
cagcttgtgctagatgaagatgatgaggagagatttgctggcagtagtgactatgtatcc
agtgatggaagcaggttgtggggtgatatttatactataacttatcagagggcagagaac
cagacagataggactccccctggaggttcaacctctaatgcttcaaaatctggcaaatct
gggtctgtattgaattctagttctgaagacaagctaaatcagacatctgtattagatagt
attttgcagggagaattgccctgtgaactggagaaatctaatcctacatacaatatattg
gcattattgcgggtgcttgagggtttgaaccaacttgcatctcgtttgagggcccaagtg
gttactgatagctttgcagagggaaaaattttggatttagttgagctaagttttaccagt
ggtgctagggttcctacagaggaatttataagcagcaaacttactccaaaattagctagg
caaatacaagatgcccttgccttatgtagtgggagtcttccctcatggtgttaccagtta
tctaaagcgtgcccttttttgtttccttttgagacccggcgacagtatttttattcaact
gcctttgggttatctcgtgcattgtatcgccttcagcagcagcagggtgctgatggtcat
ggatcaacaaatgaaagagaggtcagggttgggagattgcagcgtcaaaaggttcgtgtc
tctcgaaatcgcattttggattctgctgctaaggtgatggagttgtattctagtcaaaag
gctgtacttgaagtagaatattttggtgaagttggcaccggtctgggtcccactctggag
ttctacacacttctcagtcatgacttacaaaaagttgtacttcaaatgtggagatcaggt
tcttcagagaaatatcaaatggaaattgatggagatgaaaagaaaatgaaaaatagtgaa
ggctcttttgttggagatggagaactcgttcaagctcctcttgggctgtttcctcgacct
tggcctgcaaatgctgatgcatcagagggtacccaaattttcaaagtgattgaatatttc
cgattattaggccgtgtaatggctaaagctcttcaagatggacgcttattggatttacca
ttgtcagtggcattttataagcttgttcttggtcaagagcttgatttgcatgacattctt
ttcattgatgctgaacttgggaaaactttgcaagagttaaatgcccttgtttgccggaaa
tgttttatagaatctattggtggtagctacactgatacctttgctaatttgcattttcgt
ggggccccaatagaagatctctgcttggacttcacacttcctggttatccagagtacatc
ttgaaacctggagatgaaattgttgacatcaataatctagaggagtacatatccatggtg
gttgaggcaacggttaagactggaatcatgcgtcaaatggaagcttttagagcagggttt
aatcaggtttttgacatctcatctttacaaattttttctccccaagaactggattacttg
ctttgcggccggagagaattgtggaagactgagacactagctgatcatataaaatttgac
catggttatactgccaagagccctgccatagttaatttactcgaaattatgggagaattc
acaccagagcagcagcgtgccttctgtcaatttgttactggtgcacctaggctgcctcct
ggtggactggcagttctaaatccaaaattaacgattgtgaggaagctttcgtcaagtgca
gctaatgcttcatctaacgggaatgggccttcagaattagcagatgatgacttgccaagt
gtgatgacgtgtgcaaattacctgaagcttcctccttattctaccaaggaaattatgtac
aagaagctactctatgcaatcagtgaaggccagggatcctttgatttatcatga
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integrated database retrieval system
