Glycine max (soybean): 100783360
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Entry
100783360 CDS
T01710
Name
(RefSeq) protein STABILIZED1
KO
K12855
pre-mRNA-processing factor 6
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100783360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100783360
Spliceosome [BR:
gmx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100783360
Complex C
U5 SnRNP specific factors
100783360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
TPR_19
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_16
PAP_PilO
GAT
ubiquitin
CP12
PMC2NT
Motif
Other DBs
NCBI-GeneID:
100783360
NCBI-ProteinID:
XP_003543338
UniProt:
I1M3U2
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All DBs
Position
13:39052938..39056306
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AA seq
1034 aa
AA seq
DB search
MVFIVSPNHKTFSIDINPNTTTLHLLKLAIQHILTLPISHQRLFLSHSRRLSADNDGSDD
SLLISDLGVGPYSTLTLHVPFLGGTNPPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTR
SDIGPARAAPDLPDRSATTIGGTSGAGRGRGKPGEDEDDDDGEDKGYDENQKFDEFEGND
VGLFASAEYDEDDKEADAVWEAVDKRMDSRRKDRREARLKQEIEKYRASNPKITEQFADL
KRRLYTLSPDDWQSLEKFESGGYSSRNKKKRFESFVPVPDTLLEKARQEQEHVTALDPKS
RAANGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGMTNVDPKGYLTVLNSMKI
TSDAEISDFKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQAARQLIQKGCEECPKN
EDVWLEACRLANPDEAKAVIARGVKSIPNSVKLWMQASKLENDDANKSRVLRKGLEHIPD
SVRLWKAVVELANEEDARLLLHRAVECCPLHVELWLALARLETYDNAKKVLNRARERLSK
EPAIWITAAKLEEANGNTSMVGKIIERGIRALQREGVVIDREAWMKEAEAAERAGSIVTC
QAIIHNTIGVGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWIKAAQ
LEKSHGTRESLDALLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSE
EIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIEEERRLLDEGL
KQFPSFFKLWLMLGQLEEQLAENEKRLDRMNAAKKVYEAGLRNCPNCVPLWLSLANLEEE
MNGLSKERAVLTMARKKNPQNPELWLAAVRAELKHGYKKEADILMAKALQECPNSGILWA
ASIEMVPRPQRKTKSADAIKKCDHDPHVIAAVAKLFWHDRKVDKARTWLSRAVTLAPDIG
DFWALLYKFELQHGTEENQKDVLKRCIAAEPKHGEKWQAISKAVENSHQPTESILKKVVV
ALGKEENAAENNKH
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcatcgtgtcacccaatcacaaaaccttctccatagacataaaccctaacacc
accaccctccatctcctcaaactcgctatccaacacatcctaacccttccaatctcccac
cagcgcctcttcctctcccacagtcgccgattatccgccgacaatgacggttccgacgat
tcccttctcatctccgatctcggcgtcggaccctactcaaccctaaccctccacgttccc
ttcctcggcggcaccaacccccctgcggtccccaaaccccgcttcgacttcctcaactcc
aagccgcctccgaattatgtcgccggtctcggccgtggagccaccggattcaccacacgg
tccgatatcggtcccgcccgcgccgctcccgacctccctgaccgctccgccaccaccatt
ggcggaacctccggcgccggacgtggccgcgggaagcccggggaggacgaggacgacgac
gatggggaagacaaaggctacgacgagaatcagaagtttgatgaattcgaagggaacgat
gttgggttattcgcttcagcggaatatgatgaagatgacaaagaagcagatgcggtttgg
gaagcagtcgataagagaatggattctaggaggaaggataggagggaagcgaggttgaag
caggagattgagaaataccgtgcttcgaaccctaaaatcactgagcaattcgctgatttg
aagagaagattgtatactctttcccctgatgattggcagagtcttgagaagttcgagagt
ggggggtattcgtcgaggaacaagaagaagaggtttgagagttttgtgcctgtgcctgat
actcttttggagaaggcaaggcaggaacaagagcacgtgacagcgttggatcctaagagt
agggctgctaatgggactgagactccttgggcacagaccccggttactgatttgactgct
gttggtgagggtagagggactgtgttgtctttgaagttggataggttgtcggattcggtt
tctgggatgactaatgtggatcctaaagggtacttgactgtgcttaatagtatgaagatt
accagtgatgctgagatttcggatttcaagaaggctaggttgcttctcaagagtgtcacg
cagacgaatccaaagcaccctccgggttggattgcggctgcgaggctggaggagttggcg
gggaagcttcaagcggcaaggcagttgatacagaaagggtgtgaggagtgtcccaagaat
gaggatgtgtggctggaggcttgtaggctggcgaatccggatgaggcaaaggcagtgatt
gcacggggtgttaagtccattcctaattcggtgaagctgtggatgcaggcttcaaagttg
gagaatgatgatgcaaataagagcagggttttgaggaaggggttggagcacattcctgat
tctgttaggctgtggaaggctgttgtggagcttgctaatgaggaggatgctaggcttttg
cttcacagggctgtggagtgttgtcctttgcatgttgaactgtggcttgcacttgcgcgg
ttggagacttatgacaatgctaaaaaggttcttaatagggcgagggagaggctgtccaag
gagccggctatatggataactgctgccaagttggaggaagctaatgggaatacttccatg
gttggcaagatcattgagaggggtataagggctttgcagagagaaggtgtggtgattgat
agggaagcttggatgaaggaagcagaggcagccgagcgtgctgggtccattgtaacttgc
caagcaataattcataatactattggggttggagttgaagaagaagataggaagaggaca
tgggttgctgatgcggaggaatgtaagaaaagaggttctattgagactgccagagctata
tatgctcatgccttgactgtcttcttaactaagaagagcatatggatcaaagcagcacag
ctggaaaagagtcatggtaccagagaatctcttgatgcattacttcgtaaagcagttacc
tacagaccacaggctgaagttctttggcttatgggtgccaaagagaagtggcttgctgga
gatgtgcccgcagctcgagctatcctccaagaagcttatgctgccattcccaattccgag
gaaatatggcttgctgctttcaagctagaatttgaaaaccatgaacctgagagagctagg
atgctgttggctaaagccagagagagaggaggtacagaaagagtctggatgaaatcagca
attgtggagagagaactggggaacattgaagaggagaggagattgttagatgaaggtctg
aagcaattcccttcattctttaaattgtggttgatgcttggccagcttgaggaacagctt
gctgagaatgaaaagcggcttgatcgcatgaatgcagctaagaaggtctatgaagctgga
ttgagaaactgtcctaattgtgtaccactttggctctctcttgctaatcttgaagaggag
atgaatggactgagtaaagaacgtgcagttctcacaatggctcgcaagaagaatcctcaa
aaccctgaactctggcttgctgctgttagagcggaattgaagcatggatataagaaagaa
gctgatattttgatggcaaaagcattgcaggagtgtcctaacagtggtattctgtgggca
gcatcgattgagatggttcctcgcccccaacgtaaaaccaagagcgcggatgccatcaag
aaatgtgaccatgatccccatgttattgctgctgtggccaaattattctggcatgatagg
aaggtggacaaagccaggacttggttgagtagggctgtgacactagctcctgatattggg
gatttttgggcattgctatacaaatttgaactgcagcatggaactgaggagaaccagaag
gatgtactgaagagatgtattgctgctgaaccaaaacatggagagaaatggcaagcaatc
tcaaaggctgttgagaattctcatcaaccaaccgaatccatcttgaagaaagtagtggtt
gcacttgggaaagaagagaatgcggctgagaataataaacattga
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