Glycine max (soybean): 100784028
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Entry
100784028 CDS
T01710
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmx03016
]
100784028
Enzymes [BR:
gmx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
100784028
Transfer RNA biogenesis [BR:
gmx03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100784028
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_23
Methyltransf_31
MetW
Ubie_methyltran
HTH_65
DUF2226
Methyltransf_9
FmrO
Motif
Other DBs
NCBI-GeneID:
100784028
NCBI-ProteinID:
XP_006578341
UniProt:
I1JVJ7
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Position
4:11235018..11238015
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AA seq
374 aa
AA seq
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MIHSVLKASRFLNPRRQTLGLTISVSGCVYRLAFSSMKEINCKVDSSSCTLAPNREPCIT
DSLSVSGNCTTSSTSVKSTPEIEKKYVHHVYDAIAPHFSATRFAKWPKVAAFLSSLPLGS
LVFDAGCGNGKYLGLNQDCFFIGCDISPSLIKICLDREHEVLVADAVNLPYRTGFGDVAI
SIAVLHHLSTENRRRKAIEELVRVVKKGGLVLITVWAVEQEDSKLITKWTPLNEKYVDEW
VGPGSPRTRAPSSSSLESIPESEVSRSGEHMEVCNEPHVSRDLEEEKNIKNQQEYFVPWH
LPYHRAEISGASAEALAAGLATKDDKKGAVVYNRYYHVFSEGELESLTTGINNARIVDQF
FDKSNWCIILEKTV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgattcacagtgttctaaaagcaagtaggttcctcaatccacgtagacaaacccttggt
ttgactatttccgttagtggttgtgtttatcgtttagcatttagttcaatgaaagaaatc
aattgtaaagtggattctagttcatgtactcttgcccccaatagggaaccctgcattaca
gattccttatcagtcagcgggaattgcactacttcatctacgagtgtaaaatccacccct
gaaattgaaaagaagtatgttcatcatgtatatgatgctattgcgccgcatttcagtgcc
acccggttcgccaagtggccgaaggttgcagcatttttgtcatctttgcctttgggatct
cttgtctttgatgcgggatgtgggaatgggaaatacttaggtttgaatcaggattgtttt
ttcataggatgtgatataagtccttccttgattaagatctgcttggatagagagcatgaa
gttctggttgcagatgctgtgaatctcccttacaggactggtttcggcgatgtggcaata
tctatagctgtgttacatcatttaagcactgaaaatagaaggagaaaggcaatagaagaa
ttggtcagagttgttaaaaagggtggccttgttctgattacagtttgggctgtagagcaa
gaggatagtaagctgattaccaaatggacaccactgaatgagaagtatgttgatgagtgg
gtaggaccaggaagtcctcgtactcgggcgccttcatcctcatcattggaaagtatcccc
gaaagtgaggtgagtcgctctggtgagcacatggaagtttgcaatgagccacatgtatca
agagatttggaggaagaaaaaaatataaagaatcaacaggaatactttgttccctggcat
ttaccttatcatcgtgctgaaatcagtggtgcttctgctgaagctcttgctgctggtctg
gcaacgaaagatgacaaaaaaggtgctgtggtgtataatcgatattatcatgtttttagt
gaaggcgagcttgaaagtttgacaactggaataaacaatgccagaattgttgatcagttt
tttgataaatccaactggtgtattattcttgagaagacagtgtga
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