Glycine max (soybean): 100785036
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Entry
100785036 CDS
T01710
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100785036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100785036
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100785036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
100785036
NCBI-ProteinID:
XP_014625466
UniProt:
A0A0R0LBQ6
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All DBs
Position
2:46604114..46611355
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AA seq
1310 aa
AA seq
DB search
MAHRKRRLDQLKHPFSPHPFEAVAFGSWQAVEFIKIEAGTMSMHFADNHHVVMEKGPLSD
IRIRSRKATLPDCSRFLRPGIDVCVLSAPQQSDDADAGINLDPVWTDAKISSVQRKPHDS
ECSCQFYVNFYVHQGSLGAELRTLNKEIKVVGINQISILQKLESTPCENQHYRWASSEDC
SIISHTKLLLGKVLCDLSWLVVTTALKKKVSFCVRSLEDKLVYQVLERDTTVSTSLNNES
HIDVVNFKTEKGTLFSIVSQVATLKTKRVEPEQESHEDKESPSYNVEGLRRSKRRNVQPE
RYLGCEKVSQIDVGSFRNLPPVKINTWKDDDVDHEMNIPLAGLFSLQKKFLEGDTDNHQK
VKKASSCRELVVYQRKKTKSQKVKSGGDDQNEHQNHLAIIALPAQHDPVEVIHCDDLNDK
VTRSYGHESSEVSSKYRHLIGTTSKKNDIKLLTFESHNHAAKSDDADKIDDLSSRYHYSY
GTPKSQRMGLSDLDDMVDLGNKWEGISSSKGFQGKKQRTTYLRSRDHGEQKRYNYKDRSL
NAAAYKDLINSYLKNMNTRPTNEESAIADQWKQSETPSNIGQKTETQMLDEEDAEEESEM
DMLWRELEVSLASCYLEEETEDSHAAVFTETLENPNPGCPHDFRMNEEIGIYCYRCGFVS
TEIKYITPPFIQHSVRHQEEKQSPEEDSKTKPDEDDDIDLLPALDSPEKLVSQENENVWA
LIPELKAKLHAHQKKAFEFLWQNIAGSMDPELMETASKRRGGCVISHTPGAGKTFLIIAF
LVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWDIPIPVYLIHGRRTYRVFKQKSSIVIPG
VPKPTDDVKHVLDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKFAHRKYMAKVLRESPG
IMVLDEGHNPRSTKSRLRKVLMKVQTELRILLSGTLFQNNFCEYFNTLCLARPKFIHEVL
KALDSKYKRKGKVAKKASHLLESRARKFFLDQIAKKIDSNNGRERRQGLKMLRNVTNGFI
DVYEGRSSDGLPGLQIYTLLMNSTDTQHEILHELHKKMARVNGYPLELELLITLGSIHPW
LVKSAVCAEKFFTPAQLMELEKCKFDLRIGSKVKFVLSLIYRVVKKEKVLIFCHNIAPVK
LFVEYFEKYFGWTKGREVLVLSGELELFERGRVMDKFEEPGGVAKILLASITACAEGISL
TAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLVTGSLEEDKYKRTTWKEWVS
SMIFSEAFVEDPSQWQAEKIEDYILREMVAEDRSKSFHMIMKNEKTSTNK
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcacacagaaaaaggcgtttagatcaactcaagcatccattcagtcctcacccattt
gaagcagttgcatttggctcatggcaagctgtggagttcataaaaattgaggcaggaact
atgtccatgcattttgcagataatcatcatgtggttatggagaaaggacccttgtcagat
attcgaataaggtcaaggaaagctactttacctgattgctcgcgttttcttcgtcctgga
attgacgtatgtgtactatctgcccctcaacaatctgatgatgcagatgcaggaattaat
ctcgaccctgtttggactgatgccaaaataagctctgtacaaagaaaacctcatgactca
gagtgctcgtgtcagttttatgtcaacttctatgttcatcaaggttcactcggtgcagag
ctaagaactcttaataaggagatcaaagtagttggaatcaatcaaatatccatcctccaa
aaacttgaaagtactccttgtgaaaatcagcactaccggtgggcatcatccgaggactgt
tccattatatcacacactaaattgcttctgggaaaagtgttatgtgatctttcatggtta
gttgttaccacagctttaaagaagaaggtttcattctgcgtaagatctctagaagacaag
ctggtgtatcaagttttggaaagggatactactgttagcacttcattgaacaatgagtct
cacattgatgttgtgaatttcaaaacagaaaaaggcacgttattttccattgtttctcaa
gtagctacacttaaaactaagagggttgaacctgaacaggaatcccatgaagataaagaa
tcaccatcttacaatgttgagggcttacggcgttccaagcgtcggaatgtacagcctgag
cgttaccttggctgtgaaaaagtttcccagattgatgttggttctttcagaaacttacca
ccagttaagataaacacttggaaagatgatgatgttgatcatgaaatgaatataccatta
gctggcctgtttagtttgcagaagaagtttttagaaggggatactgacaatcatcaaaag
gtcaagaaggcgagctcgtgccgggagcttgtggtgtaccaaaggaagaagactaaatcc
cagaaagtaaagtcaggaggtgatgatcagaatgaacatcaaaatcatcttgctattatt
gctcttcctgctcaacatgatccggtagaagttatacattgtgatgatctaaatgacaag
gttactagaagttatggtcatgaatcctctgaagtttcttccaagtatcgtcatctaatc
ggtaccacttcaaagaagaacgatattaaattgttaacttttgagtctcataatcatgct
gcaaagtcagatgatgcagacaagattgatgatttgtcatcgagatatcattatagttat
ggcacccctaagtcacagaggatgggtttaagtgatctggatgatatggtggatcttgga
aataaatgggaagggattagttccagtaaaggatttcaagggaaaaaacagcgtacgaca
tatttaagaagtagagatcatggagaacaaaaaagatacaattataaagacagatcctta
aatgcagctgcctacaaggatttgataaattcgtacttgaagaatatgaatacaagacca
accaatgaagaatcagctattgctgaccaatggaagcaaagcgaaacaccaagcaacatt
gggcaaaagacggaaactcagatgcttgatgaagaggatgcagaagaagaatctgaaatg
gatatgctgtggagagaactggaagtgtcattggcatcatgttatctagaagaagagaca
gaggattcacatgctgctgttttcaccgagactctggaaaatccgaacccaggttgtcct
catgatttcagaatgaatgaagaaattggaatttactgctatagatgtggctttgtgagc
actgagatcaaatatattacaccaccctttattcaacattcagtgcgacaccaagaggag
aagcagagccctgaagaagattcgaagaccaagcctgatgaggacgatgacatagatctt
ttgccagctctagactctcctgagaaacttgtatctcaagaaaatgaaaacgtttgggcg
ttaattcccgaacttaaagcaaagttgcatgcccaccagaagaaagcatttgagtttctt
tggcaaaacattgcagggtccatggacccggaattgatggaaactgcatccaaaagaaga
ggtggctgtgtgatatcccatactcctggagcaggaaaaacttttctcattattgctttt
cttgttagctacttgaagttattcccagggaagaggccactagtccttgctccaaagaca
acactctatacttggtacaaggaatttatcaagtgggatattcctataccagtttatctg
attcatggtcgtagaacctaccgtgtattcaagcagaaatcgtcgattgttattcctgga
gttcctaagcccactgatgatgtcaagcatgttttggattgccttgagaagatacaaaaa
tggcattcgcacccgagtgttcttatcatgggttatacttcctttttaacattgatgcga
gaggattcgaagtttgcacacaggaaatatatggctaaggtattgagggaaagccccggg
atcatggtgctggatgaagggcacaatcctagaagcaccaaatctaggttgagaaaagtt
ttaatgaaagtgcagacagaactgagaatactgctttctggtacattgtttcagaacaat
ttctgcgagtacttcaacactttgtgcttggcaaggccaaagtttattcatgaagtactg
aaagcattggactccaaatacaagaggaaagggaaagttgcaaaaaaagcgagtcattta
ttagagtcgcgggctagaaagttcttcttagaccaaattgccaagaaaattgactcgaat
aatggtagggagaggcggcagggtctaaagatgttgagaaatgtgacaaatggtttcata
gatgtgtatgaaggtaggagttctgatggtctacctggtttgcaaatttatacattactg
atgaattcaactgatacacagcatgagattttgcatgaactgcacaagaaaatggccaga
gtcaatggataccctctggagttagagcttttgataactctaggttcaatacatccttgg
ttggtgaaatcagcagtatgtgctgagaaatttttcactcctgcgcaattgatggagcta
gaaaaatgcaagtttgatctgagaatagggtccaaagtaaaatttgttttgagccttatc
taccgggttgtcaagaaggagaaggttctcatattttgccacaacattgcacctgtgaag
ttatttgtggaatattttgagaagtactttggatggacaaaaggtagggaagtgttggtg
ctatctggggaactagagctgtttgaaagggggagagtaatggacaagtttgaggagcct
ggtggagtagcaaagatactacttgcttcaatcactgcttgtgctgaaggcattagttta
acagctgcttcaagagtgatcatgttggactcagagtggaacccttcaaaaacaaagcaa
gccattgcccgcgcctttcgccctggtcagcagaaagttgtttatgtttatcagctgttg
gtgacaggttcattggaggaagataagtacaaaagaaccacttggaaagagtgggtttca
agcatgatcttcagtgaggcctttgtggaggacccttctcagtggcaagctgagaagatt
gaagattatatactcagggaaatggttgcggaggaccggtctaaatcgttccatatgatc
atgaagaatgaaaaaacttctaccaacaaataa
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