Glycine max (soybean): 100785430
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Entry
100785430 CDS
T01710
Name
(RefSeq) LOW QUALITY PROTEIN: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100785430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100785430
03016 Transfer RNA biogenesis [BR:
gmx03016
]
100785430
Enzymes [BR:
gmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
100785430
Messenger RNA biogenesis [BR:
gmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
100785430
Transfer RNA biogenesis [BR:
gmx03016
]
Prokaryotic type
tRNA degradation factors
100785430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
100785430
NCBI-ProteinID:
XP_014627189
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All DBs
Position
19:complement(37684239..37748943)
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AA seq
925 aa
AA seq
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MLACPSSSLHGLTTLQRHSQPSHFLLSKPLFFPRLAASHKCNFRSLLSGNNRRRSAVRAS
ADSPEVPESVGVGDGGGLQPYSVKIPVGDRHILVETAHIGRQASGSVTVTDGETIVYTTV
CLDDVPCEPSDFFPLSVIYQERFSAAGRTSGGFFKREGKIKDHEVLICRLIDRPLRPTMP
KGFYHETQILSWVLSYDGLHSPDSLAITAAGIAVALSEVPMSKAVAGVRVGLVGDKYIVN
PTTEEMEHSELDLLLAGTDNAILMIEGYSNFLPEEKLLKAVEVGQNAVRAICNEVEALVK
KCGKPKMLDAIKLPPPELYEHVEAIASDELVKVLQIRNKIPRRKALSSLEEKVLKILTEN
GFVSNDSTLRSNSETIAEILEVEDEDEEVIVDGEVDEGDVHIKPTPRKPALLFSEVDVKL
VFKEVTSKYWRKRMVEGGKRSDGRTPDGIRPIYSRCGLLPRAHGSTLFTRGETQALAVVT
LGDKQMAQRIDSLDGVDEFKRFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLEPI
LPSEDDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKGSIAGIAMGMVLDTKE
FGGDGTPLILSDITGSEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPIMRKALLQARD
GRKHILGAMMNSSPPPAKRLSKYAPLIHVMKVRPDRINLIIGSGGKKVKSIIEESGVDTI
DTEDDGTVKIFAKDLPSLEKSKAIINSLTMVPTIGDIYRSCEIKSIASYGVFVEIAPGRE
GLCHISELSSGWLPKAEDVFKVGDRIDVKLIEINEKGQLRLSHRALLPDTEASPKDGLVE
EKTEQSKDKSSTPNSQPLLKGVQRMILCFLLKSLSGDWSALPWISLSLTKTRQRRVATKQ
LVVCLAKMKAVWLVERRKTDNIFCK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgctagcatgtcctagcagctccctccatggcctcacgacgctgcaacgccattcccaa
ccatctcacttcctcctctccaagcctctctttttccctcgcttagccgcttcccacaaa
tgcaactttcgttcgctcctttccggaaacaaccgtcgccgttccgccgtcagagcttcc
gcggactcgccggaggtgccggagtctgttggtgttggcgacggtggtggcctgcaaccg
tattccgtgaagattcccgtcggtgatagacatattttggtagagactgctcatatagga
agacaagcaagtggctctgttacagttacagatggagagactattgtgtacacaactgtt
tgcttggatgatgttccttgtgaaccatctgactttttccctctttctgttatttatcaa
gagcgtttttcagcagctggtcgcactagtggaggtttttttaagcgagaaggaaagata
aaagatcatgaggttcttatttgtagattgattgataggcctctacgtcctacaatgcca
aagggtttctatcatgaaactcaaatattatcttgggttttgagctatgatggattgcac
tccccggattctttggctatcactgcagctggtatagcagttgcactttcagaagtgcca
atgtcaaaagcagttgctggagttcgtgttggtcttgttggtgataagtatatagtaaat
cctacaactgaggagatggaacactctgagttagacctcttgctggctggcacagataat
gcaatattgatgatagagggctatagcaattttcttccagaagagaaattacttaaagct
gtagaagttggtcagaatgcagtgcgagcaatctgtaatgaggtagaagctttggttaag
aaatgtgggaagccaaagatgttggatgccatcaagttgcctcctcccgaactttatgaa
catgttgaagcaattgccagtgatgagttagtaaaagttcttcaaattagaaacaaaatt
cccagaaggaaagccctttcatcattagaagaaaaggttctgaagatactcacagaaaac
gggtttgtctcaaatgattcaacactgaggagtaattctgagaccattgcggagattctt
gaggttgaggatgaagatgaggaagtaattgttgatggtgaagttgacgaaggtgatgtt
catataaagccaactccacgtaaaccagcccttttattttctgaggtggatgtgaagttg
gtatttaaggaagttacatctaaatattggaggaagcgtatggtagagggggggaaaaga
agcgatgggcgtacacctgacggaatacgtccaatctactcgagatgtggtctattacct
agagcacatggaagtactcttttcacaagaggcgagacacaggcactagcagttgttaca
cttggagataaacaaatggcacaaagaattgacagtcttgatggtgttgatgaattcaag
aggttctatctgcagtattcatttcctccttcatgtgttggggaagttggccggattggt
gccccaagtagaagagaaattggtcatgggatgcttgctgagagatcccttgaaccaatt
ttgccttctgaagatgatttcccttacactatacgtgttgagagtactatcacagaaagc
aatggctcttcaagcatggcttctgtttgtggaggttgcttagcattgcaagatgctggg
gttcctattaagggttctattgctggaattgcaatgggtatggtactggacaccaaggaa
tttggtggagatggaactccgcttattctgtctgacataactggatctgaagatgcatct
ggagatatggatttcaaggttgctggaaatgaagatggcataactgcatttcaaatggac
attaaggtgggtggaattactttgcccatcatgagaaaggcacttctacaagcaagagat
ggcaggaagcatatacttggagcaatgatgaattcctcacctcctccagcaaaaagactt
tcgaagtatgctcctctgattcatgttatgaaggtacgaccagatagaataaatcttata
attggttctggtgggaaaaaagtgaagagcattattgaggaatctggagtagacactatt
gatacagaagatgatggcactgtgaaaatatttgcaaaagacttgcctagtttagagaag
tctaaagctattattaatagtttgacgatggttccaactattggtgatatatataggagc
tgtgaaatcaaatcaatagcctcatatggagtttttgtagagatagcacctggacgagag
ggactgtgtcatatcagtgaactgagttcaggttggctacccaaggcagaagatgttttc
aaagtgggagatcgcattgatgtaaagcttatagagataaatgaaaagggacagctgcgc
cttagtcaccgagcactgcttcctgatacagaagcttcaccgaaggatggtttagtggaa
gaaaagactgaacagtctaaggataagtctagcactcccaattcacagcctcttctaaaa
ggagttcagaggatgattctgtgcttccttctaaaaagtttgtcaggagattggtcagct
cttccctggataagcctttcactaacaaagacaagacaaagaagagtagcaacaaagcag
ttggtagtgtgtctggcaaagatgaaagcagtttggttagtggagaggcgtaaaactgat
aatatattttgcaaataa
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