Glycine max (soybean): 100785539
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Entry
100785539 CDS
T01710
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00900
Terpenoid backbone biosynthesis
gmx01100
Metabolic pathways
gmx01110
Biosynthesis of secondary metabolites
Module
gmx_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100785539
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gmx01006
]
100785539
Enzymes [BR:
gmx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
100785539
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
100785539
2.5.1.29 geranylgeranyl diphosphate synthase
100785539
Prenyltransferases [BR:
gmx01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
100785539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
100785539
NCBI-ProteinID:
XP_003547995
UniProt:
I1MNI2
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All DBs
Position
16:30223162..30224819
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AA seq
367 aa
AA seq
DB search
MSAVNLNTWPRPSFILNQTATRRSRSSPTSHFFHGVNKLPSPISSLTVAKRSFTLSAVLT
KEDTVETEEKPPIFDFKNYMVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAGGKRVRP
VLCVAACELVGGEEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDV
AVLAGDALLAFAFEHIAASTRGASPGRIVRAIGELARSIGSEGLVAGQVVDINSEGLADV
DLERLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTK
SSQELGKTAGKDLVADKVTYPKLLGIEKSKVFAAKLNKDAQDQLVGFDPVKAAPLIALAN
YIAYRQN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgtgaatttgaacacatggccacgccccagcttcattttgaaccaaaccgcc
acaagaagatccagatcctccccaacctctcatttctttcacggcgtcaataagttaccg
tcacccatttcctccctcaccgttgccaaacgctcatttacgctctcggcggtgctgacg
aaagaggacaccgtggagacggaagagaagccaccgattttcgacttcaagaactacatg
gtttccaaagcgagcgcggtgaacaaggccctcgacgacgccgtttcgctccgcgagccg
cagaagatccacgaggcgatgcggtactcgctcctcgccggcggcaagcgcgtgaggccg
gttttgtgcgtggcggcctgcgagctcgtcggcggcgaggaggccacggcgatgcccgcc
gcctgcgccatcgagatgatccacaccatgtcgctcatccacgatgacctcccctgcatg
gacaacgacgacctccgccgcggtaagcccaccaaccacaaggtcttcggcgaggacgtc
gccgtcctcgccggcgacgcgctcctcgccttcgccttcgagcacatcgccgcctccacc
cggggcgcctccccggggcggatcgtccgcgcgatcggcgagcttgcgcggtcgatcggc
tccgagggacttgtcgccggccaggtcgtcgacatcaactccgagggcctggccgacgtg
gacctcgagcgcctcgagttcatccacgtccacaagactgccgcgctcctcgagggtgcg
gtggtgctcggcgccatcctcggcggcggcaccgacgacgaggtcgagaaattgagaaaa
ttcgctcgctacattggtctgctctttcaggttgttgatgacattctcgatgttaccaag
tcatctcaggaattggggaaaaccgcaggaaaagaccttgtggcagataaggttacttac
cccaaacttttgggtattgagaaatctaaggtgtttgctgcgaagttgaacaaagatgct
caggatcagcttgttgggtttgaccctgttaaggctgctcctttgattgctttagccaat
tacattgcttataggcagaactag
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