Glycine max (soybean): 100785926
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Entry
100785926 CDS
T01710
Name
(RefSeq) THO complex subunit 4B isoform X2
KO
K12881
THO complex subunit 4
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
gmx03015
mRNA surveillance pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100785926
09122 Translation
03013 Nucleocytoplasmic transport
100785926
03015 mRNA surveillance pathway
100785926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100785926
03041 Spliceosome [BR:
gmx03041
]
100785926
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100785926
TREX complex
100785926
Spliceosome [BR:
gmx03041
]
Complex C
Other components
EJC/TREX
100785926
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100785926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_9
Motif
Other DBs
NCBI-GeneID:
100785926
NCBI-ProteinID:
XP_003518653
UniProt:
I1JDQ5
LinkDB
All DBs
Position
2:complement(8326240..8328737)
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AA seq
260 aa
AA seq
DB search
MAGGIDMSLDDIKKRSAAAVASRRRFTVVHNPARTTPYPIPQVRQQSMVALFPEMVLEES
GAAKIESGTKLYLSNLDHGVTNDDIKLLFSEEGELKSYTIHYDQSGRSKGTAEVVFVRHS
DALLAIKKYNNMRLDGKPLQIELVGTSLATPAVAPLCQNNLMGRPNDVHFSTRGRVGDSG
FHNDFAQGYLPRGRGEEKDHIRKVSFRDLDHSFERFHRTQSQRSYAKVNGNFGKVTAKDL
DDDLERYHLEAKRIKKQNGK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggcatcgacatgtccctcgacgacattaagaagcgttcagccgccgccgtg
gcttctcgccgccgattcacggttgttcacaacccggccagaacgacgccgtacccgatt
ccgcaggtaaggcaacagagcatggttgcattatttccagaaatggttttggaggagtca
ggcgcggctaagattgaaagtggcaccaagctctatttatctaacttggatcatggagtt
accaacgatgatatcaagctgctgttctcggaagagggtgaattgaaaagctacactatt
cattatgatcagagtggaagatcaaagggaactgcagaagttgtgttcgtgaggcattct
gatgctttattagccatcaagaaatacaacaatatgaggcttgatggaaagccattgcaa
attgagcttgttggaacaagtttggctactcctgctgtcgctcctctttgtcaaaataac
ttgatgggaagaccaaatgatgtccattttagcacacgaggaagggttggcgatagtggg
tttcacaatgactttgcacagggctaccttccaaggggccgtggagaagagaaggaccat
attcgaaaggtgtcttttagagatcttgatcatagctttgagaggtttcaccgcactcag
agtcagagaagctacgcaaaagtaaatggcaattttggaaaggtgactgctaaagatctt
gatgatgacttggagaggtatcacttagaggctaagcggattaaaaagcaaaatggaaag
tga
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