Glycine max (soybean): 100785937
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Entry
100785937 CDS
T01710
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100785937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100785937
03110 Chaperones and folding catalysts [BR:
gmx03110
]
100785937
03029 Mitochondrial biogenesis [BR:
gmx03029
]
100785937
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100785937
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100785937
Messenger RNA biogenesis [BR:
gmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100785937
Chaperones and folding catalysts [BR:
gmx03110
]
Heat shock proteins
HSP60 / Chaperonin
100785937
Mitochondrial biogenesis [BR:
gmx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100785937
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100785937
Exosomal proteins of other body fluids (saliva and urine)
100785937
Exosomal proteins of breast cancer cells
100785937
Exosomal proteins of colorectal cancer cells
100785937
Exosomal proteins of bladder cancer cells
100785937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NAD-bd_HRPKS_sdrA
DNA_pol3_delta
Motif
Other DBs
NCBI-GeneID:
100785937
NCBI-ProteinID:
XP_006574985
UniProt:
I1JEN0
LinkDB
All DBs
Position
2:12388088..12394717
Genome browser
AA seq
605 aa
AA seq
DB search
MACSSFTFANPSSIPRLRNSLSSSSISPRAMAKELYFNHDGSATKKLLAGVDMVAELLGV
TLGPKGRNVVLPNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDQAGDGS
TTSVVLARGLIREGTKVIAAGMNPVQIARGIEKTAAALVSELRLMSREVEDHELADVAAV
SAGNDYSVGNMISEALHKVGRMGVVTIETGRSTENCLEIVEGMQFDRGYLSPYFVNNRRK
MTVELHNCKLLLVDKKITKTKELINILNNSAKEKYPVLIVAEGIEQEALAPVIKNKLRGA
LKVAAIKAPAFGERKTHYLEDIAILTGGTVIREDMGFTLEKAHKNDLGSATKVVITKNST
LIVTDGSTREAVEKRVHQLRRLVENTVENFQKNILNERIARLSGGIAILQVGAQTQVELK
DKQLRVEDALNATKAAIEEGVVVGGGCSLLRLSQKVDGIKKLLDNEEQQIGAEIFRRALS
YPTRMIAKNAGLNGNVIIDKVLSDNNMNFGYNAARDSYEDLMKAGIMDPTKVVRCCIEHS
ASVAKAFLTSNAVVVERKELEPIPMPRRKSMPMPTSGNELEPMSIPRRKPMSMPMATPGL
GPMGF
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcatgttcttcattcacatttgccaatccatcatcaattcctagactgagaaattca
ctttcttcttcttctataagcccgagagctatggccaaagagctttacttcaaccacgac
ggttcagccacgaaaaagctgttggcaggagtggacatggtggctgagctgcttggtgtg
acattgggtccaaaggggagaaatgttgtgctgccaaataagtatggaccacccaagata
gtaaatgatggagaaactgttctcaaggagattgaattggaagatccgttggaaaatgtt
ggagttaaattggtgagacaagctggtgctaaaacgaatgaccaagctggtgatggctca
actacatctgttgttcttgctcgtggcttaatcagagaggggacaaaggttattgcagct
ggaatgaatcctgttcaaattgctcgtgggattgagaagacagcagcggcacttgtttct
gaactcagattgatgtcaagagaagttgaggatcatgaacttgcagatgttgctgcagtc
agtgctgggaatgattattcagttggaaacatgatttctgaggctctgcataaagtaggt
agaatgggagtagtgacaattgaaaccggaaggagtactgagaattgtctagagattgtg
gaagggatgcaattcgatcgtggatatctgtcaccatactttgtcaacaatagaagaaag
atgacagttgaactccacaactgcaagttgcttttggttgacaagaaaatcacaaaaaca
aaggaattgatcaacatattgaacaattctgcaaaagaaaagtatcctgttttgatagtt
gcagaaggcattgaacaagaagctcttgctccagtcatcaaaaataaacttcggggtgct
cttaaggtagctgccattaaggctcctgcctttggtgaacgcaagacacattacttggaa
gatattgccatcttgactggaggtactgtaatcagagaagatatgggtttcaccctagaa
aaggctcacaagaatgatctgggttctgctactaaggttgtcataacaaagaattctacc
ttaatagttactgatgggagtactcgagaagctgttgagaagagggttcatcaacttagg
aggcttgttgagaatactgtagaaaatttccaaaagaatatattgaatgaaaggatagca
aggttatctgggggcattgctattcttcaggtaggagcacaaacacaagtagagttgaag
gataaacagttaagagtagaagatgctctaaatgcaaccaaggctgcaatcgaggaaggt
gtagtggtcggtggtggctgtagccttttaagactatctcaaaaggtggatggcataaaa
aaactactggacaatgaagaacaacagattggtgctgaaatcttcaggagagcattgagc
tatcctacaagaatgatagcgaagaatgctggtttaaacggcaatgtcatcatagataag
gttttatcagacaataacatgaattttggttacaatgctgctagagacagttacgaggat
ctcatgaaggctgggatcatggatccaacaaaggtagttaggtgttgtatagagcattca
gcttctgtggccaaggcatttctaacatctaatgcagtagtcgttgagcgcaaggaatta
gagccaataccgatgccacgaagaaagtctatgcccatgcccacctcaggtaatgaatta
gagccaatgtccataccacgaagaaagcccatgtccatgcccatggctaccccaggttta
ggacccatgggattttag
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