Glycine max (soybean): 100786049
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Entry
100786049 CDS
T01710
Name
(RefSeq) LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100786049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100786049
03012 Translation factors [BR:
gmx03012
]
100786049
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100786049
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100786049
Translation factors [BR:
gmx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100786049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
dsrm
DEAD
AAA_22
Dicer_dimer
AAA_19
Motif
Other DBs
NCBI-GeneID:
100786049
NCBI-ProteinID:
XP_040865544
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All DBs
Position
15:complement(36299611..36320832)
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AA seq
829 aa
AA seq
DB search
MTNTTATSRTNSELFGKVVVASKVPLPNYCPDLDDKRPQRELVIPLSLQRRVEEGLLQEY
LDRLQLNSAKTTDSLDDLNSTNQVKDIDMDENADSFVDESVMEKVLQKRSLRMRNMQRAW
QESPEGRKMLEFRKSLPSFKEKQGLLEAIAHNQVIVVSGEAGCGKITQLPQYVLESEIES
GRGAFCSIICTQPRRISVMAVAERVSAERGEPLGETVGFEVRLEGMKGKNTHLLFCTSGI
LLRRLLSDRNPNGITHVFVDEIHERGMNEDFLLIVLKDLLPRCRDLRLVLMSATLNAELF
SNYFGGAPTFHIPGFTYPVRAHFLEDILKXPDIXMTSFNQIDDYGQEKLWKTQKQLAPRK
RKNQIAALVEDALSKSSFEKYSSKARESLASWAPDCIGFNLIEAVLCHICRKERPGAVLV
FMTGWENISSLRDQLKAXPLLGDPNRVLLLTCHGSMAISEQALAGTAKSRFSAKDYSDHM
ALVXAYEGCKDAEREGSAYEYCWRNFLSAQTLQVIHSLXKQFSFILKEACLVDAEASVIN
KLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVLLYANSVNARYQTIPYPWL
VFGEKVKVNAVFIRDSTGVSDSILILFGGALSNGIQAGHLKMLDGYVDFFMDHNLADSYV
KLKEELNKLIQKKLEDPSIDIHKEGKYLMLAVQELVSGDQCEGRFVFGRESRKPKASNDE
NKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLA
ERDAAIEALAWLTHTSDNNQHEDDKSPPDITDNMLKLLGKRRKSKQGHG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatacgactgcgacttcgagaaccaacagtgagttgtttggaaaagtggttgtt
gctagcaaggtgcctcttcctaactactgtccagatttggatgacaaacgtccacaaaga
gagttggtgattccactaagcttgcaaaggagggttgaggagggtttgttgcaggaatac
cttgatagacttcagctgaattctgcaaagacaactgatagcctggatgatttgaactcc
actaatcaagttaaagatatagacatggatgaaaatgctgattcttttgtggatgaatct
gttatggaaaaggttctccagaagaggagtttgaggatgcgtaacatgcaaagagcttgg
caggaatctcctgagggcaggaagatgctggaattccggaagtctctaccatcattcaag
gagaagcaaggtttacttgaagctatagcacataatcaggtgattgttgtatctggagag
gctggctgtggtaaaatcactcaacttcctcagtatgtattagaatcagagatagagtct
ggtcgtggagcattttgtagcattatttgcacacagcctcgaaggatctctgttatggca
gtggcagagagagtgtcagcagagcgaggagagcctcttggtgaaacagttggcttcgaa
gttcgactagaaggaatgaaaggaaaaaacacccatctgctattttgtaccagtggtata
ttacttagaaggttgttgagtgatcgaaacccgaatggtataacccatgtttttgttgat
gaaattcatgaaagaggcatgaatgaagacttcttactgattgtgttaaaggatctgctt
ccacgctgtcgtgatttaagattggttttaatgagtgccaccttgaatgctgagcttttt
tcgaattatttcggaggtgctcctacatttcatattccgggtttcacctatccagttaga
gcacactttttagaagatattttgaaatgaccggatatannaatgacttccttcaaccaa
attgatgattacggtcaagagaaattgtggaagacacaaaagcaactagcaccacggaag
aggaaaaaccagatcgctgctctcgttgaggatgctctttctaaatcaagctttgagaaa
tatagctccaaggcacgtgaatcactagcatcttgggcacctgactgcattgggtttaat
ctcattgaggctgttctatgccatatatgtcggaaggaacgaccgggtgctgtcttagta
tttatgactgggtgggagaatataagctctttaagagatcagcttaaagcanatcctctt
ttaggagatcccaatagggttctgcttctaacatgtcatggttcaatggcaatttcagaa
caggctttagcagggacagcgaagtctaggttttctgctaaagattacagtgatcatatg
gctcttgtttgagcatatgaaggatgtaaagatgcggaaagagaagggtcggcttacgag
tactgctggagaaattttctatcagcccaaactcttcaggttattcattcactatagaaa
cagtttagctttatcttgaaagaagcttgcttggtagatgcagaagcgagtgtcattaac
aaattgagtcacaatcagtctcttgtgcgtgcagtcatatgttctggactctttcctggc
atagcatcagtggtgcacagggagacatccatgtcattcaaaacaatggatgatggccag
gttttattgtatgctaattcagtgaatgcacgttaccagaccattccttacccttggttg
gtttttggtgagaaagttaaggtcaatgctgttttcatccgtgattccactggtgtatct
gattcaatacttatcctttttggtggtgctctaagtaatgggatacaggctgggcatctg
aaaatgttagatgggtatgttgacttcttcatggatcataatttagctgacagctatgtg
aagcttaaggaagagctcaataagcttatccagaagaagctggaagatcctagcattgac
attcacaaggaagggaaatacttgatgcttgctgttcaggagctggtttcaggggatcaa
tgtgaaggaaggtttgtatttggccgcgaaagccggaagcctaaggcctccaatgatgaa
aacaaatttacgaaagatggaacaaatcccaagagcttgctgcagacactgttgatgcga
gcagggcactccccaccaaaatacaaaacgaaacatcttaagacaaatgagtttagggca
ctggtggagttcaagggaatgcaatttgttggcaaaccaaagagaaacaagcaacttgca
gaaagggatgcagctatagaggcattggcttggttgactcacacctctgacaataatcag
catgaagatgataagtctcctcctgatataactgacaacatgctaaaactcctagggaag
cgtagaaaatcaaagcaaggccatggttga
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