Glycine max (soybean): 100786384
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Entry
100786384 CDS
T01710
Name
(RefSeq) uncharacterized protein LOC100786384
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100786384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100786384
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100786384
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100786384
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100786384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
100786384
NCBI-ProteinID:
XP_006595975
UniProt:
K7M5M9
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All DBs
Position
14:7286979..7292453
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AA seq
625 aa
AA seq
DB search
MSNNTNSSSSKTQPTFLNPPNPNPQHFSKSNGVGNHQGQNLMPPFMQPPMNAAPFMNAAN
HNHFPLHMPHMGLPGHQQGQPHVGGLGPQNSVGNANYNNPMFPPVQGQVMQNQAQFNLSP
LQGQFLAQSILNMLQQPNMNMSMPNGQFCGPYLMQNMNPQLPMQMPNPSQGVPYGMHPGS
CPMFGFPNQVPQAMVPQNSMFSTNPQLGFVPGNQVRPQIDPNEKNLNPPNVSANSFVSSS
PFSSQQLQGNTSGSLNPNLAHTNNSQPPAFMKQEKPNSNIKTNVPNSNWKGSPSKNFKNK
PNRGGFQAGFQKSKFHDVNNGKKGSGFPIEHNGKGPNSGRGGHYGLKPKEHKQQPERSLS
VTYTVQEIQQWREARKKNHPFNNNIQKKHSEHPKDRKAINREVLQRELKEVLAKQAELGV
EVAEIPSYYLKNSDNQALQSEGKNKFTDKRKFQNKFNKKSDRKGRFAKRQKFDDKDFSES
PSLKKRKPTLLQKLLSSDVKRDKSHLIQVFRFMVMNSFFKHCLDKPLRYPLVVVKEKGSE
VDGEEKYLHTGKDVLKGGNEETVQKIVTFNNDNSHDCEDEDSDDDENDSIVDNNLHKDPS
SLVKRQCDSGEGIGKFDEEEGEIIE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaataccaactcctcctcctcaaaaactcaacccactttcttgaatcctcct
aatcctaacccccaacatttctcgaaaagcaatggtgtgggcaatcaccaaggccaaaac
ttgatgcccccttttatgcagccacccatgaatgcagcacctttcatgaatgctgcaaat
cacaatcattttcccttgcatatgcctcatatgggtttgcctggtcatcaacagggtcaa
ccacatgtggggggtttaggtccccaaaacagtgttggcaatgccaattacaacaatcca
atgtttcctcctgttcagggacaagtcatgcagaatcaagctcaattcaatttgtctcca
ctccagggacaatttttagcacaaagtattctcaacatgcttcagcagcccaacatgaat
atgagtatgccaaatggccagttttgtggcccttaccttatgcagaatatgaatccgcag
ttacctatgcaaatgccaaacccttctcagggggttccgtatggtatgcatcctggttcc
tgccccatgttcgggtttccaaaccaagtgcctcaggctatggtccctcagaattcaatg
ttttccacaaatccccagttaggttttgtgcccggaaatcaggtccggccacagattgac
ccaaacgagaaaaaccttaatccaccaaacgttagtgcaaattcttttgtatcatcatcc
cctttttcgtctcagcagttacaagggaatacttctggatcacttaatcctaatttggct
cacacaaataactctcaacctcctgcatttatgaaacaggaaaaacctaatagcaatatt
aaaactaatgttccaaactctaattggaaaggatcacctagcaaaaacttcaaaaataaa
ccaaatcgaggggggtttcaagcaggattccagaagtcgaaatttcatgatgtcaacaat
ggaaagaagggaagtgggtttcctatagaacataatggcaaagggcctaacagtgggagg
ggaggacactatggtttaaaaccaaaggaacataagcagcaaccagaaagatccttgtct
gtgacttacactgtgcaagagatccaacagtggcgtgaagcacggaaaaagaatcatcct
ttcaataacaacattcagaagaagcacagtgaacacccaaaagacaggaaggccattaat
agggaggtcttacaaagagagctcaaggaggtgttagcgaagcaagctgaattgggagtt
gaagttgctgaaataccatcatactacttgaagaattctgacaatcaagctcttcagagt
gaagggaaaaacaaatttactgacaaaagaaaattccaaaacaagttcaacaagaaatca
gacagaaaaggtaggttcgccaagaggcagaagtttgatgacaaagatttttcagaaagc
ccctctttgaagaagaggaagcctacattattgcagaaactcctgagttcagatgtaaag
agggataagagccacctgattcaggttttcaggttcatggtaatgaattctttcttcaaa
cattgtcttgataagccgctgagatatccgttggtcgtggttaaagaaaaggggtctgaa
gttgatggtgaagaaaaatacttgcacaccggaaaagatgttcttaaaggagggaatgag
gaaacagttcaaaaaattgtgaccttcaataatgataatagccatgattgtgaagatgaa
gatagtgatgatgacgagaatgattctattgttgataataatcttcataaagatccttct
tccttggttaaaagacagtgtgatagtggcgaaggaattgggaaatttgatgaagaggag
ggagaaattatagaatga
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