Glycine max (soybean): 100786478
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Entry
100786478 CDS
T01710
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00730
Thiamine metabolism
gmx01100
Metabolic pathways
gmx01240
Biosynthesis of cofactors
Module
gmx_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
100786478
Enzymes [BR:
gmx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
100786478
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
100786478
NCBI-ProteinID:
XP_003538282
UniProt:
K7LQS4
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Position
11:complement(25788763..25795756)
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AA seq
648 aa
AA seq
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MASLHANVTSVVYNSGNRVSQSKFASSSFLSGFDVVGRASSAWKKELVPSSISLVPRATL
TFDPPTTNSDITKQKKHTLDPASPDFLPLPSFEQCFPKSTKEHREVTHEETGHVLKVPFR
RVHLSGEAGHFDTYDTSGPQNVNPRTGLPKLRGGWVDRREKLGYPRFTQMYYAKQGIITE
EMLYCATRENLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVAS
SIEEEVYKVQWATMWGADTAMDLSTGRHIHETREWILRNSAVPIGTVPIYQALEKVNGIA
EDLNWKVFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRMTGIVSRGGSIHAKWCLAYH
KENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKD
VQVMNEGPGHVPMHKIPENMQKQLEWCSEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA
LGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPYAQAWDDELSKARFEF
RWMDQFALSLDPMTATSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDVRKYAAEHGYG
TDEALQRGMDAMSAEFQAAKKTISGEQHGEAGGEIYLPEAYVRTKRTT
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacttcatgctaatgtgacatcagttgtttacaacagtggcaaccgtgtttct
caatcgaaatttgcaagctcttccttcttgtctgggttcgatgttgttggtcgtgcttca
agtgcttggaagaaggaacttgtcccatcttccatttccttggtgcctagagccacccta
acatttgatcccccaactaccaattcagacataaccaagcaaaagaagcacactcttgac
cctgcttctccagattttcttcctcttccttcatttgaacagtgctttccaaagagcacc
aaagaacacagggaagtcactcatgaagaaactggtcatgtgctcaaagttccctttcgt
cgagttcacctgtctggggaagcaggacactttgatacctatgacactagcggtccccaa
aatgtaaacccaaggacaggactcccaaaattgcgcggagggtgggttgataggagggag
aaactgggttatccaagattcactcagatgtactacgctaagcaaggaatcatcactgag
gagatgctttactgtgccactcgtgagaaccttgacccagagtttgtgaggtcagaagtt
gctcgtggacgtgctatcatcccttcgaacaagaaacacttggagttagagcccatgata
gttggaagaaactttttggtaaaagtaaatgccaacattgggaattctgccgttgctagc
tctatagaagaggaagtttacaaggttcaatgggcaactatgtggggagcagatactgcc
atggatctctcgactggtcgccacatccatgaaactcgagagtggatcctacgcaactct
gctgtaccaattgggactgtgcctatttatcaagcacttgaaaaagttaatgggattgct
gaggatcttaactggaaggttttcagggacaccctgattgaacaagctgagcagggtgtg
gattacttcaccatccatgcaggagttcttctgagatacgttccattaacggctaagcgc
atgacaggaatagtctcaagaggagggtctattcatgcaaagtggtgcttagcttatcac
aaagagaattttgcttatgagcactgggatgagatacttgacatctgcaatcagtatgat
gtggccctatccattggtgatgggctaagacctggatccatctatgatgcaaatgacaca
gctcagttcgccgaactcttgacacaaggagaattgacccgtagagcatgggagaaggat
gtacaggtgatgaatgaaggacctggacatgtcccaatgcacaagattcctgaaaacatg
cagaaacagttagaatggtgtagtgaagcgcctttttacactcttggtcctttgactact
gatattgcccctggctatgatcacatcacctctgcaattggtgctgcaaatattggggca
cttggtacagctcttctctgttatgtgactccaaaagaacatcttgggttgccaaaccgg
gatgacgtgaaggctggcgttatagcttacaagattgcggctcatgctgctgatttagcc
aaaggccatccatatgctcaagcttgggatgatgaattgagcaaggcaagatttgagttc
cgatggatggaccagtttgctttgtcattggatccgatgacagccacgtccttccatgac
gaaaccctaccggcagatggtgcgaaagtggcccatttctgctcaatgtgtggccctaaa
ttctgctctatgaagattacagaggatgtgaggaagtatgctgcggaacatggctatgga
actgatgaagctttgcagcgtgggatggatgctatgagtgctgaatttcaagctgccaag
aagaccatcagtggggagcaacatggtgaagctggtggagagatttacttgccagaagct
tacgttagaaccaagaggactacttaa
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