Glycine max (soybean): 100786705
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Entry
100786705 CDS
T01710
Symbol
HDA9
Name
(RefSeq) histone deacetylase 19
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03082
ATP-dependent chromatin remodeling
gmx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100786705 (HDA9)
03083 Polycomb repressive complex
100786705 (HDA9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100786705 (HDA9)
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100786705 (HDA9)
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
100786705 (HDA9)
HDAC complexes
Sin3A-HDAC complex
100786705 (HDA9)
BRAF-HDAC complex
100786705 (HDA9)
REST complex
100786705 (HDA9)
SHIP complex
100786705 (HDA9)
MiDAC complex
100786705 (HDA9)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100786705 (HDA9)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100786705 (HDA9)
Chromatin remodeling factors
NuRD complex
100786705 (HDA9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100786705
NCBI-ProteinID:
XP_003526730
UniProt:
K7K0Q1
LinkDB
All DBs
Position
6:1752..15005
Genome browser
AA seq
497 aa
AA seq
DB search
MDTGGNSLPSAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VHKPFPARDRDLCRFHADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGI
DDESYHFLFKPIIGKIMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSWHLLEEIRSKLLENLSKLQHAPSVQFQERPPDSDLGEADEDHDDGDGPWDPDSDMDI
DVERELVSSKVKKEISEHQPNDLEDQTSGEHLRGSDTAVAETCMKALDISCQKADEDNVK
VEQNTVNDLAKETDLKC
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggataccggtggcaattctttaccatctgcacctgatggggtgaagagaaaggtgtgc
tatttttatgatccggaggttgggaattactattatggtcaaggtcacccaatgaagcca
catcgtatacggatgacacatgctcttctagcccattatggattgctacagcacatgcag
gtccacaagccatttcctgctagagacagggacctttgtcgttttcatgctgatgattat
gttgcattccttcgaagcataactcctgaaacacagcaggatcatctaaggcaactgaaa
cgctttaatgttggtgaagattgtcctgtttttgatggcctctactctttctgtcaaact
tatgcagggggttcagttgggggtgctgtcaagttaaatcatgaccaatgtgatattgct
gtcaactgggctggagggttgcatcatgccaagaagtgtgaggcttctgggttttgctat
gttaatgatatagtccttgcaatcttagaacttctcaaacagcatgagcgtgttctatat
gtggacattgatatccaccatggagatggtgtggaggaagctttctacactactgacaga
gtcatgactgtttctttccataaattcggtgactattttcctggaactggggatgtacgt
gatattggatatggaaaaggaaaatattactctcttaatgttccacttgatgatggcatt
gatgatgagagttatcattttttgttcaaaccaataatcggaaaaataatggaagtgttc
cggcctggtgcagtagttctccagtgcggtgctgattctttatctggagaccgattggga
tgtttcaatctttcaattaggggtcatgcagagtgtgtcaaatacatgagatcattcaat
gtgcccctcttgctactaggtggtggtggctacaccattcggaatgttgctcgttgttgg
tgctatgagacaggagttgctcttggaatagaagttgatgacaaaatgccacagcacgag
tattatgaatattttggtccagattatacccttcatgttgccccaagtaacatggaaaac
aagaattcctggcatttacttgaagaaattcgatctaaactacttgaaaatctttccaag
ctgcagcatgctcctagtgtccaatttcaggaaaggcctcctgattctgatcttggagag
gccgatgaagatcatgatgatggagatgggccatgggatccagattctgacatggacatt
gatgtcgaacgtgagcttgtctcgagcaaagtaaagaaagaaatttctgaacatcagccc
aatgatctggaggaccagacaagtggagagcatttgagaggctctgatactgcagttgct
gaaacttgcatgaaggctctagatatttcttgtcagaaagctgatgaagataatgtgaaa
gtagaacaaaatactgtgaatgatttggccaaagagacggacctgaagtgttaa
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