Glycine max (soybean): 100786789
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Entry
100786789 CDS
T01710
Name
(RefSeq) spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100786789
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmx04812
]
100786789
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
100786789
Membrane trafficking [BR:
gmx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100786789
Cytoskeleton proteins [BR:
gmx04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100786789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
NPHP3_N
AAA_22
Vps4_C
AAA_16
AAA_14
Mg_chelatase
DUF815
AAA_25
AAA_2
TIP49
IstB_IS21
nSTAND3
TniB
RNA_helicase
MCM
AAA_24
MIT
NACHT
DUF4368
Motif
Other DBs
NCBI-GeneID:
100786789
NCBI-ProteinID:
NP_001242287
UniProt:
I1L6T2
C6T9S1
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All DBs
Position
9:48921222..48927225
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AA seq
486 aa
AA seq
DB search
MSFLQGIIDSFNSIFTHDNNNNYHNTNSPSSSSSTNRMEASPPPSVSNERVAYKLKGYFD
LATQEIAKGVRAEEWGLIDDALLHYRNAHSILLEANSTPVPSYITTSEQQKVQSYREKIS
KWQSQVSERLQTLARRAGSSSANQSTSKLGQTAAAPIKTLSTRKNVLQKPPQRGGQVNKV
GSPKSSQASGVNYDDKLVEMINTAIVDRSPSVRWEDVAGLEKAKQALMEMVILPTKRRDL
FTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVTAASLTSKWVGEAEKLVRTLF
MVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTSNPDDIVIVIGATN
KPQELDDAVLRRLVKRIYVPLPDENVRKLLLKHKLKGQAFSLPSRDLERLVKETERYSGS
DLQALCEEAAMMPIRELGVDILTVKANQVRGLRYEDFKKAMTIIRPSLNKSKWEELERWN
EEFGSN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttgcagggaataattgattccttcaactccatcttcacacatgataacaac
aacaattatcacaacaccaattctccttcttcttcttcctcaacgaatcgaatggaagct
tctcctcctccttcggtttcgaacgagcgcgttgcatacaagctcaaaggctacttcgat
ttagcaacgcaagagatcgcgaagggcgttagggcagaggaatggggcttgatcgacgac
gcgcttcttcactaccgtaacgcgcactcgatcctcctcgaagctaattcaactcccgtt
ccttcctacatcactaccagtgaacagcagaaggtgcaatcgtatcgagagaagatatct
aaatggcagagtcaggtttctgagaggttgcagactctcgctagacgagctggcagctca
tctgcaaatcagagcacctcaaaacttggtcaaactgctgccgctccaattaagacattg
agtactagaaaaaatgtgttacaaaagccccctcaaagaggaggtcaggtgaataaagtt
ggaagcccaaaatctagtcaagcatctggtgtaaattatgatgacaaactagttgaaatg
attaacactgccatagtagatagaagtccttctgttagatgggaagatgttgctgggctt
gaaaaggcaaagcaagctttaatggagatggtcattttgccaactaaaagaagagacttg
tttacgggacttcgaaggccagccagaggtttgcttctctttggtccgcctggtaatgga
aaaaccatgcttgccaaagcagtggcttcagaatcacaagcaacattttttaatgtcaca
gcagcttccttgacatcaaaatgggtgggtgaagctgaaaagcttgtccggacactattc
atggtagctatatccagacagccatctgtaattttcattgatgagattgatagtataatg
tcaacaaggttggcaaatgagaatgatgccagcagacgattaaaatctgaatttcttatc
cagtttgatggggtgacctccaatcctgatgatattgtgattgtaattggtgcaacaaat
aagccacaagaattagatgatgcagttcttaggagactggtaaagagaatatacgtacct
ttaccagatgaaaatgttcggaagcttctgctgaaacacaaactcaagggtcaagcattc
tccttacctagtagagatcttgagaggcttgtaaaagagactgaacgatattctggcagt
gatctgcaagccttgtgtgaagaagctgcaatgatgccaattagagagctgggtgttgac
attcttactgtaaaggctaatcaggtaagaggactgagatacgaggattttaagaaggca
atgactatcattaggccgagcttaaacaaaagtaagtgggaagagcttgagcgttggaat
gaggaatttggctctaattga
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