Glycine max (soybean): 100786941
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Entry
100786941 CDS
T01710
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100786941
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmx01009
]
100786941
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100786941
03036 Chromosome and associated proteins [BR:
gmx03036
]
100786941
Protein phosphatases and associated proteins [BR:
gmx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100786941
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100786941
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100786941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Vmethyltransf_C
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
100786941
NCBI-ProteinID:
XP_003531629
UniProt:
I1KUW4
LinkDB
All DBs
Position
8:15811723..15819500
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AA seq
514 aa
AA seq
DB search
MNGGDEVVAAPASPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGG
RVVLFERTDTKDHCGSRRDLERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSDMNVDPKLMGNGSIASSSNSGSSKS
YLANGVSSDGPYNYLNNDFSFPPGGVPSLRLPLVTSHETSLMARCRRVYAHAHDYHINSI
SNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLA
YSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSR
DYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVSTGSYS
NLFRVFGCVPGSTEATTLEASKNPMRRQVPTPSRPSRSLGNSITRVVRRGAESAGVDANG
NSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatgaggtcgtggcagctccggcgagtccaccgcagccgctggagtgg
aaattctcgcaggttttcggggaacgtacggcgggggaggaagttcaggaagtggatata
atttctgctattgaatttgacaagtctggtgatcatcttgctactggtgatcgtggtggt
cgagtagttctctttgaacggacagatacaaaagatcattgcggatcaagaagggacttg
gagaggatggactattctattagtagacatcctgagttccgttataaaacagagtttcag
agtcatgagcctgagtttgactatcttaagagtttggaaatagaagagaaaattaacaaa
atcaaatggtgccaaacagccaatggtgctttgttccttctatccacaaatgataaaacc
atcaaattttggaaggttcaagaaaagaaggtcaagaaagtttcagacatgaatgttgat
cctaaattaatgggaaatggctctattgctagttcaagtaattcgggtagctctaaatca
tatcttgcaaatggagtatcttcagatggaccatataattatttaaacaacgatttctca
tttccaccaggcggtgtaccttcactaagattaccattggtaaccagccatgagaccagt
ttgatggctcgatgccgtagagtatatgcccatgctcatgattatcatattaattctatt
tcaaataacagcgatggcgaaactttcatatcagctgatgatttacgaataaatctttgg
aacctggaaattagcaatcaaagttttaatattgttgatgtaaagcctgcaaatatggag
gatctgaccgaggttataacatcagcagaatttcaccctacacattgtaatacattggca
tatagcagttcaaagggttcaattcgtcttgttgacttgcggcagtcagcattatgtgat
tctcatgccaaactatttgaggaacaagaagcccctgggtccagatcatttttcacagag
attatcgcttcaatctcagacataaaatttgggaaggatggaagatatatacttagtcgt
gattacatgaccttaaagttatgggacatcaatatggattctggtccagttgcaacgttc
caggttcatgagtatttaaggccaaagctttgtgatttatatgaaaatgattcaattttt
gataagtttgagtgttgtctaagtggtgatggattgcgtgtttcaactggctcttacagc
aatctattccgtgtgtttggttgtgttcctggaagtactgaggctacaactttggaagcc
agtaaaaatccaatgagacgccaagttccaaccccttcaagaccatctagatcattggga
aacagtataacaagagttgtaagacgtggagcagagagcgccggtgttgacgcaaatggg
aattcttttgatttcacaacaaagttgctgcacttagcatggcacccaactgagaattca
attgcttgtgctgctgcaaatagcttatacatgtactatgcttga
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