Glycine max (soybean): 100787242
Help
Entry
100787242 CDS
T01710
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100787242
04121 Ubiquitin system [BR:
gmx04121
]
100787242
Enzymes [BR:
gmx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100787242
Membrane trafficking [BR:
gmx04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100787242
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100787242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
CxC4
zf-Nse
Rad50_zn_hook
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
100787242
NCBI-ProteinID:
XP_003556948
UniProt:
I1J3Y3
LinkDB
All DBs
Position
10:17701219..17705379
Genome browser
AA seq
309 aa
AA seq
DB search
MSNSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGMDNNEERDQR
LGLMETFSAFMRHQMADRGRSHDIRVRTDSNPEHSASFAPLLIFGGHIPFRLSRHGGFEA
LFNGAPGIGLTQGNTGDYFIGPGLEELFEQLSANNRQGPLPASRSSIDAMPTIKIVQRHL
RSDSHCPVCKDKFELGSKARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELPPQGLSSSNG
GANGRSRSARVSSSGRESHGRRNPFSFLWPFRSSHSSSNDEATGSSTPTPTIPENSHHHH
AGYSGWPFE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacagtaggaacactcattggtgttatagttgcaggaggccagttcggctgggg
cggcgagatgtggtttgtcctagctgtaatttgggatttgttcatgaacttaatgatatt
gtccatgttaatccttttgacctctttggaatggacaacaatgaagaacgagatcaaagg
cttggactaatggaaacattctctgcctttatgaggcatcaaatggcagatagggggcga
agccatgacatcagggtgcgaacagattcaaatcctgaacacagtgcaagttttgctcct
ctgttgatctttggtggccacataccttttagattgtccagacatggtggctttgaagct
ctatttaatggggctccaggaatcggtctgacacagggtaacacaggcgattattttatc
ggtcctggactagaagaactgtttgaacagctttcagctaacaacaggcaaggtcccctg
ccggcatcaaggtcctcgatcgatgcaatgcctaccatcaagatcgtgcagaggcatctt
cgatcagattcgcattgtccggtgtgcaaagataaatttgaactgggatccaaagcaaga
caaatgccatgcaaccatttatatcactcagattgtattgttccatggttggtgcagcat
aactcctgccccgtttgccgccaagaactgccgccacaaggattgagtagtagtaacggt
ggcgccaatggtagaagtagaagtgcaagggtaagtagtagtggtagggagagccatgga
aggagaaatccattttcctttttgtggccttttcgttcttctcattctagcagtaatgat
gaagcaacaggaagcagcacaccaacaccaactatccctgagaatagccatcatcatcat
gctgggtattctgggtggccatttgaatga
DBGET
integrated database retrieval system
