Glycine max (soybean): 100787285
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Entry
100787285 CDS
T01710
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100787285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100787285
03110 Chaperones and folding catalysts [BR:
gmx03110
]
100787285
03029 Mitochondrial biogenesis [BR:
gmx03029
]
100787285
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100787285
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100787285
Messenger RNA biogenesis [BR:
gmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100787285
Chaperones and folding catalysts [BR:
gmx03110
]
Heat shock proteins
HSP60 / Chaperonin
100787285
Mitochondrial biogenesis [BR:
gmx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100787285
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100787285
Exosomal proteins of other body fluids (saliva and urine)
100787285
Exosomal proteins of breast cancer cells
100787285
Exosomal proteins of colorectal cancer cells
100787285
Exosomal proteins of bladder cancer cells
100787285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AAA_lid_4
Motif
Other DBs
NCBI-GeneID:
100787285
NCBI-ProteinID:
XP_006583012
UniProt:
I1KGB8
LinkDB
All DBs
Position
7:complement(718416..725877)
Genome browser
AA seq
574 aa
AA seq
DB search
MYRLARRVGSSIASPSAKNLVYGGVLSSRNFVSKDINFGVGARAAILHGVTEVADAVKVT
MGPKGRNVIIERSRGNPRITKDGVTVAKSIKFKDKSKNVGADLVKQVAKATNTAAGDGTT
CATVLTQAILTEGCKSIAAGVNVMDLRHGINKAVDAVITELKRRALMISTSEEITQVGTI
SANGERDIGELIARAMEKVGKEGVITVVDGNTLDNKLEVVEGMKLTRGYISPYFITDQKT
QKCELENPFILIHDKKISDINSLLKILELAVTKKRPLLVVAEDVESDALAMLILNKHHAG
LKVCAVKAPGFGDNRRASLDDLAILTGGEVITDERGLALDKVQPEMLGTAKKVTITIDDT
IILHGGGDKKVIEERCEQLRTAMEKSSATFDKEKAQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGIVPGGGVALLYATKVLDNLQTQNEDEKRGVQIIQNALKAP
TITIASNAGFDGALVHSKLLEQDDHNLGFDAAKGVYADMVKAGIIDPLKVVRTALVDAAS
VSLLLTTTEAAVVDNSHDKNKPPSRVPDMDDLDL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgattagctcgtagagtaggatcctccattgcttctccttccgctaagaatctc
gtatatggtggagtattgtcaagcagaaattttgtgagcaaagatatcaactttggggtt
ggggctcgtgccgcaatcctccatggggtaactgaggttgctgatgctgtcaaagttacc
atgggacccaagggtcgcaatgtgataattgagagaagtcgtgggaatcccaggatcaca
aaggatggtgtgactgtggccaaaagtatcaaatttaaagacaaatcaaaaaatgttggt
gcggatctagtcaagcaggtggccaaggctaccaacactgctgctggagatggtacaact
tgtgcaactgttttgactcaggcaatactcacagaaggatgcaaatcgattgctgctggt
gtaaatgttatggatttacgtcatggaataaataaggcagttgatgctgtaattactgag
ttgaagaggagagcattgatgattagtacgtcagaagagataacccaggttggaactata
tctgcaaatggggagcgtgacattggagaattgatagcaagggcaatggagaaagttggg
aaggaaggggtcattactgtcgttgatgggaacactttggataataagttggaagtggta
gaaggaatgaagttaaccagaggctacatatctccttattttattactgatcagaagacc
cagaaatgtgaattggagaacccctttattctcatccatgacaagaaaatttcagacata
aattcactgctgaaaatactggagctggctgtaacgaaaaaaagaccactcctagttgtt
gctgaagatgttgagagtgatgcattggctatgctcatactcaacaagcatcacgcaggg
cttaaggtttgtgctgtaaaagctcctggttttggggataatagaagagcaagtctagac
gatcttgcaattcttactggaggagaggtcatcactgatgagcgtggtttggctcttgat
aaagtccaaccagaaatgcttggcactgcaaaaaaggttactatcaccattgatgacact
attattctacatggtggtggggataagaaggtcattgaagagagatgtgaacagctgagg
acagctatggaaaagagttctgccacatttgataaagaaaaagcacaagaacgcctatca
aaactatctggtggtgtagctgttttcaaagttgggggggctagtgaggccgaagttggg
gaaaggaaagatagagtaacagatgctttaaatgccactagagcagctgtggaagaggga
attgttccgggtggtggagttgctctcctatatgctaccaaagtcttggataaccttcaa
acccaaaatgaagatgagaaaagaggagtacaaattattcaaaatgcactcaaggcaccg
acgattacaatagcttcaaatgctggttttgatggtgctttggtccacagcaaattgttg
gaacaagatgatcataatttaggttttgatgctgctaaaggtgtctatgctgatatggta
aaggctggaataatagatcctctcaaagttgttagaactgctttggtagatgctgccagt
gtgtcattgctactgacaacaaccgaggcagctgtggtggataattcacatgacaagaat
aaacctcctagtcgggtgccagatatggatgatttggatctctaa
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