Glycine max (soybean): 100787373
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Entry
100787373 CDS
T01710
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X2
KO
K13217
pre-mRNA-processing factor 39
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100787373
Spliceosome [BR:
gmx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100787373
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_12
NRDE-2
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
100787373
NCBI-ProteinID:
XP_003521310
UniProt:
K7KFI9
LinkDB
All DBs
Position
3:39313240..39323544
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AA seq
828 aa
AA seq
DB search
MGDSEAVVTEASAAEAYASAGYAETGSNPAPEAGATVDQSAGEAAQASSTYGYGYSNVGD
VNSYAGDPNSILQQAQFSATGESKPAGGAADSNEASAGVGSTAADSTMVSDYNSSVNGGV
AGAVTNTSGLENGNALENADGSADEKQQADGYAALSAEEDRLWNIVRANSLDFTAWTSLI
EETEKAAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVT
YSVDMWLHYCIFAITTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARL
AVIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTADEAAAVAGVASEATGQATEGEVH
PDGAERSPKSVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLN
VGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASGSMDLANNV
LARATQVFVKRQPEIHIFCARFKEQTGDIDGARAAYQLVHTETSPGLLEAIIKHANMEYR
LEKMEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVL
LSKPLLEAILHFEAIQPLPKRVDIDFLESWVVKFIMPNSESPGVASATEREELSSIFLEF
LNLFGDVQSIKRAEDRHAKLFLPHRSMSELKKRHAEDFLASDKTKAPRSYSAQSPAQSGM
GAYPNAQNQWSNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGGNYANSQLPTSV
PQSTAYGAYPPAYPAQPAVPQQNYAQPVAAAPAQQPAAVPQAYYGSYY
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgggagatagcgaagcggtggttacggaagcatctgctgctgaggcatatgcttcggct
ggttatgctgagaccgggtcgaatcctgctcccgaggcaggtgctactgttgatcaatct
gctggagaagctgctcaggccagttcaacttatggttatggttattctaatgttggtgac
gtgaattcgtatgctggggatccgaattccatcctacagcaagctcaattcagtgcaact
ggtgagtccaagccagctggtggagcggctgattctaacgaggcctctgctggggttgga
agcacagctgctgactctactatggtatctgactacaattcatctgtaaatggtggtgtt
gccggtgcagtgacaaatacttctggacttgaaaacgggaatgcgttggagaatgctgat
gggtcggctgatgagaaacagcaagcagatggttatgctgccttgtctgctgaagaagat
cgactgtggaatatagtgagagctaattctttagatttcactgcctggacttccttgatt
gaagagacagagaaggcagcagaggacaatattttgaagattcgaagagtctatgatgct
tttctagcagaatttcccttgtgctatggttattggaagaaatatgctgaccatgaggca
cgccttggctctattgataaagttgtcgaagtctacgagcgtgcggttcaaggggttaca
tattcagtggacatgtggttgcattattgcatatttgctataaccacatatggggatcca
gacactgttcgtaggctttttgaacgaggattagcttatgttggaacagattatctttct
tttcccctctgggataaatacattgaatatgagtatatgcagcaggactgggcccgcctt
gccgtgatctacaccagaatattagagaacccaaatcaacaattagatcggtatttcagc
agcttcaaagagttagctggaaatcgacctttatcagagttacgaactgctgatgaagct
gctgcagtggcaggagttgcttcagaggctactggccaagctactgagggagaggttcat
cctgatggtgcagagcgttctcctaaatctgtaagtgctggcttaacagaagcagaagag
ttggagaagtatatcgccattagagaagagatgtataagaaagctaaagagttcgattct
aagatcattggttttgaaacagctatcaggaggccctactttcatgtacggcccctcaat
gttggagagcttgagaattggcataactatctggactttatagaaagggagggtgacttg
agcaagattgtcaagttgtatgagagatgtgtcattgcatgtgccaattatcctgagtat
tggatacgctatgttttgtgtatggaagccagtggaagcatggatcttgcaaataatgtt
cttgctcgggcaacccaagtctttgttaagagacaaccagagatacatattttttgtgct
cggttcaaggagcagactggagatatagatggtgctagagctgcatatcaacttgtgcat
actgaaacttctcctggtcttcttgaagcaattatcaaacatgccaatatggaataccga
ctggaaaaaatggaggatgccttctctttgtatgaacaggccattgccattgagaaaggg
aaagaacattcacaaacattgccgatgttgtttgctcaatattctcgatttgtatatttg
gcttctgggaatgcagagaaggcaaggcagattctagttgaggggcttgagaatgttttg
ttgtcaaagccactacttgaggctatattgcattttgaggctattcaacccttgccaaag
cgcgttgatattgactttctggagtcatgggttgtcaaattcataatgcctaactcagag
agtcctggtgtagcaagtgcaacagagcgtgaggaactttctagtatttttctggagttt
ttaaatctctttggtgatgttcaatctatcaagagggctgaagataggcatgccaaattg
tttttgccacacagaagcatgtcagagttgaaaaaacgtcatgctgaggatttcttagct
tcagacaaaacaaaagcgccgagatcttattctgctcaatcacctgcccaatctgggatg
ggtgcatatccaaatgcacagaaccagtggtctaattatggagttcaacctcaaacttgg
cctccagttacacaagcacaagggcaacaatggactgctggctacacccaacaggcttcc
tacggggcttatgctggatatgggggcaactatgcgaattctcaattgcctacatcagtt
ccacaaagtactgcatacggagcctatcctcctgcatatcctgcacagccggcggttcct
caacaaaactatgcacaacctgtggctgcagcccctgcacagcaacctgctgcggttcct
caagcttattacgggagttattattga
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