Glycine max (soybean): 100787884
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Entry
100787884 CDS
T01710
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100787884
04121 Ubiquitin system [BR:
gmx04121
]
100787884
Enzymes [BR:
gmx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100787884
Membrane trafficking [BR:
gmx04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100787884
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100787884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_4
DUF7560
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
100787884
NCBI-ProteinID:
XP_003519952
UniProt:
K7K6V8
LinkDB
All DBs
Position
2:complement(6224626..6226275)
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AA seq
319 aa
AA seq
DB search
MENDIEGVHWCNICSKMVNPMSDDENICPFCETEFSEVMDNLRDQNDVFDLRSAWVFSLY
APIFLGLMGAFSPSLARIAPHGGSSSSRGVEEEVEQERENELVLGRRRRTSTYMMHLFRG
LHIRMVSELENPEDNNRNMDGSSILVIDPFSEGALIVRGPNLSHTTSSNENNAVGSSLND
LVVGSGFDLLLQHLAQIGPGGYSSVNPPAQKAAIEALPSVTSEEKFQCPVCLEDVEVGSE
AKEMPCMHKFHGDCIVSWLKLHGSCPVCRFQMPSEDSTLEANVDNRNSELVRAGEERPRN
GRRNWFPVLQSFNNFLPYP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgatatagagggtgtgcattggtgcaacatatgctctaaaatggtgaatcca
atgagtgatgatgagaacatatgcccgttttgtgagacagaattttctgaggtaatggac
aacctaagggaccagaatgatgtttttgacttaaggtcagcttgggtgttctcgctttac
gccccaatttttctcggtttgatgggtgctttcagcccttccctagcaagaattgctcca
catggaggcagcagcagctcaaggggtgtggaagaagaggttgagcaagagagggaaaat
gaacttgtgcttgggagaaggagaagaacttcaacttacatgatgcacctctttcgcggt
cttcacattaggatggtgtctgaacttgaaaaccctgaagacaataataggaacatggat
ggcagcagcatacttgtgattgatccattcagtgaaggtgcattgattgtgaggggacct
aacttgagccacacaactagttcgaatgagaataatgctgtcggaagctccttgaatgac
cttgtggtaggatctggctttgatttgttgctacagcatttggcacagattggtcctggt
ggctattcaagtgttaaccctccggcacagaaggcggcaattgaggcattgcctagtgtg
actagtgaggagaagtttcagtgcccagtgtgcttggaggatgttgaggttgggagtgaa
gcaaaggagatgccatgtatgcacaagttccatggtgactgcattgtctcatggctcaag
cttcatggctcttgtccagtttgcaggtttcagatgccatctgaggattcaactcttgaa
gccaatgtggacaatcggaacagtgagctggtcagagctggagaagagagacccagaaat
ggaaggaggaactggtttccagtgctgcaatcgtttaacaattttcttccttatccttga
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