Glycine max (soybean): 100788186
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Entry
100788186 CDS
T01710
Name
(RefSeq) geranylgeranyl pyrophosphate synthase-related protein, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00900
Terpenoid backbone biosynthesis
gmx01100
Metabolic pathways
gmx01110
Biosynthesis of secondary metabolites
Module
gmx_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100788186
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gmx01006
]
100788186
Enzymes [BR:
gmx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
100788186
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
100788186
2.5.1.29 geranylgeranyl diphosphate synthase
100788186
Prenyltransferases [BR:
gmx01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
100788186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
100788186
NCBI-ProteinID:
NP_001242759
UniProt:
C6T7T0
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All DBs
Position
8:7089472..7092080
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AA seq
342 aa
AA seq
DB search
MAPFAFATLPSSHICRLPKPTNLKFRVRCSTAASSPSSVSTRSKAAGFDLKTYCANLMVQ
INQKLDEAIPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGGSRLAAFPTACALE
MVHAASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPSDLV
PESHLLRVIAEIARSVGSTGMAAGQFLDLEGGPNAVGFIQEKKFGEMGESSAVCGGFLAG
AEDDEIERLRRYGRAVGVLYAVVDDIIEERLKVEGDGNRKNKGKSYAEVYGVEKAIEKAE
ELRAKAKEELDGFEKHGERVLPLYSFVDYAFDRSFSVDDASG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctccttttgcttttgcaacattgccctcttctcacatctgccgcctcccaaagccc
acaaacttgaagtttcgagttcgctgctctactgccgcgtcttctccttcttcggtttcc
actagatcaaaagctgctggctttgatttgaagacatactgtgccaacctaatggtgcag
atcaatcagaagctggacgaagctatcccggttcagtttcctccgcagatatatgaagct
atgaggtattcagtccttgccaaaggtgccaagcgagccccacctgttatgtgcatctct
gcctgtgaactctttggtggcagccgccttgccgcctttcccactgcctgtgcccttgaa
atggttcatgcagcttcattgatacacgatgatcttccctgcatggatgactccccctca
cgccgtggtcagccttcaaaccataccatctatggtgttgacatggcaattcttgcgggc
gatgcactctttccccttggatttcgacacattgtttcacaaactccatcagaccttgtg
cctgagtcgcacctccttcgtgtgattgccgagatagcccgctctgtaggatccactgga
atggctgcagggcagttcctggaccttgaaggaggacccaatgcagttggatttatacaa
gaaaaaaagtttggtgaaatgggggagtcttctgcagtgtgtggaggattcttggctgga
gctgaagatgatgagatagagagactgaggaggtacgggagagctgttggggtattgtat
gcagttgtggatgatattatagaagagagattgaaagttgagggagatggtaacaggaaa
aacaagggtaagagttatgcagaggtttatggagttgaaaaggcaatagaaaaagctgaa
gagctcagagcaaaggctaaagaagaattggatggatttgagaagcatggggaacgggtc
cttcctctctacagttttgtggattatgcttttgatagaagtttcagtgttgatgatgcc
agtggataa
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