Glycine max (soybean): 100788212
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Entry
100788212 CDS
T01710
Name
(RefSeq) uncharacterized protein LOC100788212 isoform X1
KO
K15199
general transcription factor 3C polypeptide 1
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100788212
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
100788212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-block_TFIIIC
DUF6581
RNA_pol_Rpc34
MarR_2
HTH_24
HTH_IclR
HTH_20
HTH_micro
MarR
Motif
Other DBs
NCBI-GeneID:
100788212
NCBI-ProteinID:
XP_006599735
UniProt:
K7MJ25
LinkDB
All DBs
Position
16:complement(37932298..37949464)
Genome browser
AA seq
1788 aa
AA seq
DB search
MDSVMNWAVEEICGCGCIEEGLTLAALWAKLEASPSLSSSNLHLSPTVKRAIWTNLLRVP
TLRFEPHSCLELEDAQNLNLRIFPQHTLANNFLGLYDFQSLQDDQMRVLRLLAGARANGI
TQTQLAKRLHIAANKFHYVLRSLECQGLIVKHSAIEKKKQNGESKNYPCVTTHLVCLHRY
AKQVASHHQRFEFEVTKFNTPGDDYEDADGTTLQTDVHLKDYTPQMKAICDKLAKANGKV
LLVSGIKKDLGFCGSRQGQRAWRKISQRLKADAIVEQFDAKVNDKIEACLRLLDPITTGS
GNEDKKLNSGKICQVIDQVVELPIEHQIYDIIDAAGSYGITLKEICERLGIELKKNHIQL
INLCYRFGMKVQEEQCLKTKTIRVWTSKNFNPEPEVEHIFKVDENKFFNCVPDSSKIISE
FEASSSTINGELADPANLEDREVGAELSCVSPRNTELNFVETPTDLQDLAFGRRGTVSDC
KLVSSTVEAGNTPSGAFPSDVLKPFSTVNSIRRANRILKRLKDERFLLKPEINRWLNSLE
NDNSTKVDHKTIDRILTKLQEQGQVKRIIVSSPVISEYSRTKKCVVVVHSSVSQSPELFD
EIQDRVRSFNTCIRSKSTSYQKNDEFIPVMEDIQKNQSVIVSAGRANKAEAKHANGFVLA
KMIRAKLLHSFLWDCLHREASYIDDLSSKKCVNEQTNNPHSSIKLFCLEAAIKEMSVELL
LQVVGSTKKYEEMIEKCKMGLRLSDLPLEEYKCLMDAHATGRLSLVIDILRRLKLIRMIT
DLQSRDGVKTPHTFTHVMELRPYIEEPFSNDAPSLNFISLDLRPRIRHDFILSNRDAVDK
YWHILEYCYATADRKAASYAFPGSKVNELFRFRSWTSTCLMTAEQRAELLKHVTKDNLSE
KISYRNSEKIAKDLNLSLEQVLSMYSSKRRRHFLNQLDDEEKEDNSPECKGNSSRCRKKN
SSEPRLAKHARIDAVTDVEDMHIEESHNFGVHSRERATHMQKFEDDYGLEDSQDCIPLIN
QCVLTQMKLTCQRRFVWSDKIDRQLVIQYVKHRAVLGARYHRINWKSISDLPASPSACMR
RMNLLNSNLRFRTAVNGLCNMVSERYAKQLEKSQKLSLNKDDCKQFVRSQSCEGGILNHF
SPDVEIQMTSLNRDAWDDFENKSIKAALDEILRCKMMAKLDASSSQKVQSQYEGWADANE
SQENEEITSAIPCEIIQSHHGNRANVYGQVNESLAVSNAVELVKIVFLSTSTRLQAPNLL
ADILRRYSEHDLIAAFNYLREKKIMVGGTGSECVELSQQFLHSVSKSPFPFNTGKQAVKF
SAWLEERDKDLTEVGVNLAEDLQCGDIFHLFALVSSGELSIMPSLPHNGVGEADLRSAKR
KFDATEFSYSNKTKRPKSLFGIDGEIISRREKGFPGIFISAHRTAISRADILNLFKDNDN
NGQPFEGQSSNYSLPDHMLEIIKSFDPITLEENHTKSPWESMAGYAQHLLSESFNQEHAR
AICAELFRVVYAAIQKSGDQGLSMGEISQVINLPGAEVDGLIVDALQAFGQALKVNAYDT
VRVVDALHLHKYFFTPVSDFHQHVVQPSSTKIIEKSDHICELYKSEERNTTSIDTLRERN
TGIDNVHKVTILNLPHGDVDPENQACDRIEGSKQDRLGLSSVNHEKETLKFSAGEFCVPI
LPWINGDGTINTIVYRGLRHRVVGIVMQNPGILEDSILHHMHVLNPQSCRTLLELMVLDK
HLIVKKMHQIIFDGGPSLLQDLIGSKSSQPKLICREHFFANPMSTSLL
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggactcagttatgaattgggcagtggaagagatatgtggttgtggttgtattgaagaa
ggactcactcttgcagccctatgggccaagcttgaagcctcaccctctctttcatcctcc
aatctccatctctctcctactgtcaaaagagccatttggacaaacctcctccgcgttccg
actctccgatttgaaccacactcttgtttggagctggaggatgctcagaacctcaattta
aggatctttcctcagcatacccttgccaacaactttttaggcctttatgatttccagtct
ctccaagatgaccaaatgcgcgtccttcgccttcttgccggtgctagagccaatggcatc
actcaaactcagctcgctaagcgtttgcacattgctgcaaacaaattccattatgtgttg
aggagtcttgagtgtcaaggcttaattgtcaagcactctgctatcgagaagaagaaacaa
aatggtgaatccaaaaattatccatgtgtaactacccatttagtatgcttacatcgctat
gcaaaacaagttgcctctcatcatcaaaggtttgaatttgaagttaccaaattcaacacg
cccggcgatgactacgaggatgcagatggaaccacacttcaaacagatgttcatcttaag
gattatacacctcaaatgaaagctatttgtgacaaacttgcaaaagccaatggcaaggtt
cttcttgtgtctggtattaagaaggatcttggtttctgtggatcgcgtcaaggacaaagg
gcttggagaaaaatttctcaaaggttgaaagcagatgctattgtggagcagtttgacgct
aaggtgaatgacaagattgaggcttgcctgcgacttcttgacccaataactactggatct
ggaaatgaagataaaaagttaaactccgggaaaatatgtcaagttattgatcaggttgtg
gagcttcccattgagcatcaaatttacgatattattgatgctgcaggatcctatggcatt
actttgaaggagatatgtgaaaggcttgggattgaactgaaaaagaaccacattcaactt
ataaatttgtgctatagatttggaatgaaagtgcaagaagaacaatgcctaaaaactaag
acaattcgagtttggacttctaaaaatttcaaccctgaaccagaagttgaacatattttc
aaggttgatgaaaataaattttttaactgtgtgcctgacagttcaaaaataatatctgaa
tttgaggcttcaagttcaactatcaatggagaacttgcagaccctgcaaatttggaagat
agagaagttggtgcagaactctcttgtgtatctccaagaaatacagagttaaactttgta
gaaacaccaacagacttgcaagatttggcctttggccgaagaggtacggtttctgactgc
aaattggtcagttcaacagtggaggcaggcaatacaccatcaggagcattcccatctgat
gtgttgaaaccattctctactgtgaatagcattagaagggcaaataggatactaaaaagg
ctaaaggatgaaaggttccttttgaaacctgagataaataggtggcttaatagccttgag
aatgataactctacaaaagtggaccacaagactattgaccgaatattaactaaacttcag
gaacaagggcaggtcaaacgcataatagtaagttcgcctgttatttctgaatattcccgg
acaaaaaaatgtgtggtggttgtgcattcatccgtgagtcaatctcctgagttatttgat
gaaattcaagatagagtgcgatcatttaatacttgtattcgcagcaaaagtacttcatat
cagaaaaatgatgaattcatacctgtaatggaggatattcagaaaaatcaaagtgttata
gtttcagctgggcgggctaataaagcagaagccaagcatgctaatggatttgtattagca
aaaatgattcgtgcaaagctactccacagttttctttgggattgtctgcatagggaagca
agctatattgatgatttatcatctaaaaaatgtgtcaatgagcaaactaataatcctcat
agtagcatcaaactattttgtctagaagctgctattaaagaaatgtcagttgaactatta
ttacaagttgttggctccactaaaaaatatgaagaaatgattgaaaaatgcaagatgggt
ttacgtctctctgatcttcctctggaggagtacaagtgtttaatggatgctcatgcaaca
ggaaggctgtcattagttattgatattttacgacgattaaagttgattcggatgataact
gatttgcaatctagagatggagtcaaaacccctcatacttttactcacgtgatggagctt
aggccttatattgaggaacccttttcaaatgatgcaccatctttaaattttatctctctt
gatctccgaccaagaatcaggcatgattttattctgtctaatagagatgcagttgataaa
tattggcacatattagagtattgctatgctactgctgatcgaaaagctgcttcttatgca
tttcctggatctaaggtcaatgagctttttcgcttccgttcatggacatccacctgtcta
atgacagctgaacaacgtgctgagcttttaaagcatgtaacaaaggataatcttagtgaa
aaaatttcatataggaattctgagaagattgcaaaagatctgaatcttagcttggagcag
gtacttagcatgtattctagtaagcgccgccgccatttccttaatcagttggatgatgaa
gagaaagaggataattcacctgaatgtaagggtaattcatctcgttgtaggaaaaaaaat
tccagtgagcccaggcttgcaaaacatgcaagaattgatgcagtaactgatgttgaggac
atgcacatagaagaatcacataattttggtgtgcattcaagagagcgtgccacacatatg
caaaaatttgaggatgattatggacttgaggattctcaagactgtatcccccttattaac
cagtgtgtcttgacccaaatgaagctaacgtgccaaaggagatttgtttggtcagacaaa
attgacaggcaattggtgatccaatatgttaaacaccgtgctgttcttggggccagatat
catcgtataaattggaagtcaatttctgatctcccagcttctccaagtgcttgtatgagg
agaatgaatttgttgaatagtaatttgaggtttaggacagctgtgaatggactctgtaac
atggtcagtgaacgatatgcaaagcaactcgaaaagtcccaaaagttgtcattaaacaaa
gatgattgcaaacagtttgtgcgatcccagtcctgtgaaggtggtatcctcaatcatttt
agtcctgatgttgaaattcaaatgacgagtctaaatagagatgcttgggatgactttgag
aacaaaagtatcaaggcagcccttgacgagattctccgttgcaagatgatggctaagctg
gatgcctcctcctcccaaaaagttcaatcgcaatatgaagggtgggcagatgcaaatgaa
tctcaagaaaacgaagaaattacatcagctattccttgtgaaattattcagagtcatcat
ggtaatagggccaatgtttatggacaagtaaatgaatcattggctgtttcaaatgctgta
gagctagttaaaattgtttttttaagcacctcaacacgtctccaggcaccaaatttacta
gccgacattcttcggcgatactcagagcatgatctaattgctgcatttaactatcttaga
gagaaaaaaattatggttgggggcactggcagtgaatgtgttgaactgtcacaacagttc
ttgcacagtgtttcgaagtcaccatttccatttaatactggaaagcaagctgttaaattt
tctgcgtggctggaggaaagagacaaggacctcacagaagtgggtgttaatcttgctgaa
gatctacaatgtggggacatttttcatttatttgctctagtctcatcaggtgaactttct
attatgccatccctaccacataatggtgttggagaggcagacttgagaagtgcaaagcgt
aaatttgatgccactgagttttcatatagtaataaaactaaaagaccaaaatccttgttt
ggaatagatggtgaaattatttctcgtcgggaaaaaggttttcccggtatcttcatttct
gcacaccgtacagcaatttcaagagctgatattttaaatttgttcaaggataatgataac
aatggccaaccttttgagggccaaagcagtaattattcacttcctgaccatatgttggaa
atcattaaatcgtttgaccctataactctggaagaaaatcataccaaatcaccctgggaa
agtatggcaggctatgcacagcatttgttgtcagagtctttcaatcaagaacatgcacgt
gccatttgtgctgagctcttcagagtcgtttatgctgccattcaaaagtctggtgaccaa
ggattaagcatgggagaaatttctcaggttataaacttgccaggagcagaggtagatgga
ttgattgttgatgctcttcaagcatttgggcaagccttaaaggtcaatgcttatgatact
gtccgtgttgttgatgccttacaccttcacaagtacttttttacacctgtgtctgatttt
catcaacatgttgtacaaccttcctcaacaaaaatcattgagaaaagtgatcatatatgt
gagctttacaaatcagaagaaaggaacactacttctattgatactctaagggaaagaaac
actggtattgataatgtgcacaaagtgacaattcttaatcttccacatggggatgtagat
cctgaaaatcaagcttgtgataggattgaaggctctaagcaagacagacttggcttatcc
agtgtcaatcatgaaaaagaaacacttaaattttctgctggtgaattttgtgtgccaata
ttgccatggatcaatggagatgggaccatcaacaccattgtttacaggggactcagacat
cgtgttgttggaatagtgatgcaaaacccagggatattggaggattctattctacatcac
atgcacgtgttgaatccccagagctgtagaactctcttagaactgatggttctggataaa
cacctaattgtgaagaagatgcatcaaataatatttgatgggggaccctccttacttcag
gatcttattggaagcaaatctagtcaaccaaagttgatttgcagagaacatttcttcgcc
aatcccatgagtacttccttgttgtag
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integrated database retrieval system
