Glycine max (soybean): 100788329
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Entry
100788329 CDS
T01710
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
gmx
Glycine max (soybean)
Pathway
gmx03030
DNA replication
gmx03410
Base excision repair
gmx03420
Nucleotide excision repair
gmx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100788329
03410 Base excision repair
100788329
03420 Nucleotide excision repair
100788329
03430 Mismatch repair
100788329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmx03032
]
100788329
03036 Chromosome and associated proteins [BR:
gmx03036
]
100788329
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100788329
DNA replication proteins [BR:
gmx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100788329
DNA Replication Termination Factors
ELG1-RFC complex
100788329
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100788329
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100788329
Check point factors
HRAD17(Rad24)-RFC complex
100788329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_16
Rad17
RuvB_N
SLFN-g3_helicase
Mg_chelatase
AAA_11
AAA_24
AAA_5
AAA_14
ADK
ResIII
nSTAND3
AAA_assoc_2
AAA_2
AAA_28
Effector_1
PhoH
AAA_30
AAA_7
AAA_25
AAA_19
NPHP3_N
ATPase_2
RNA_helicase
AAA_18
TIP49
IstB_IS21
bpMoxR
Parvo_NS1
NB-ARC
DUF815
Motif
Other DBs
NCBI-GeneID:
100788329
NCBI-ProteinID:
XP_003526646
UniProt:
I1KAD1
LinkDB
All DBs
Position
6:complement(9404882..9410711)
Genome browser
AA seq
342 aa
AA seq
DB search
MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNGYPCPPFKIIV
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMS
SRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARLFGSSISSENLISVSGVV
PAKVVEALLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARIS
KKLGEADKCLVDGADEYLQLLDVVSNTIKAFNSLPEAFAYEC
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaatcctgcagagctctcagccatgggtcgagaaataccggccaaagcaagtg
aaagatgttgcccaccaagatgaagttgttcgagtactaacaaacacccttgaaactgga
agttgcccccacatgctcttctatggtcctcctggcacgggaaaaacaactactgccctt
gctatcgcccatcagctttttggtcctgagctatataagtctagggtgctggagttgaat
gcaagtgacgatagagggattaatgttgttcgaacaaagataaaagattttgctgctgtt
gctgttggtactaatcagtgtaaaaatggttatccttgtccaccatttaagattattgtt
ctagacgaggcagattcaatgactgaagatgctcagaatgccctgaggcgtacaatggaa
acttactctaaagttacaaggttcttttttatatgcaactatgttagcaggattatagaa
ccacttgcttcaaggtgtgcaaaattcaggttcaaaccattatcagaagaaatcatgagc
agccggatattatacatctcccaagaagagggactctgtcttgatgctgaggctctttca
accctgagttttatttctcatggagatcttcgccgggcaatcacatacttgcagtctgca
gctcgcttatttggatcttcaatttcttcagagaatctgatttctgtgtcaggggttgtt
ccggcaaaggttgtggaggcacttcttaaagcttgcaaaagtggtaattttgatttggca
aacaaggaagtcaacaatttcattgcagagggatatccagcttctcagatgcttactcag
ttatttgaggccattgttgaagaaaatgacttatctgatgaacagaaagcaagaatatca
aagaagctgggtgaagctgataagtgcttagttgacggtgctgatgaatacttgcaactt
cttgatgtggtcagcaatacgattaaagcttttaacagcttgccagaagcatttgcttac
gaatgttag
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