Glycine max (soybean): 100788476
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Entry
100788476 CDS
T01710
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100788476
Membrane trafficking [BR:
gmx04131
]
Protein recycling
Others
EARP complex
100788476
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
EXOC6_Sec15_N
TetR_C_30
Get2_like
Motif
Other DBs
NCBI-GeneID:
100788476
NCBI-ProteinID:
XP_006592295
UniProt:
I1LRA9
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Position
12:complement(6570657..6587169)
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AA seq
1128 aa
AA seq
DB search
MQPNLFPFGSVLGNPFIFNGDGDLSEGGGGIESSRVFFLLPFFLLSQGGAMDLSKVGEKI
LSSVRSARSLGLLPPVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGS
IPQGQVVEELEDEFYEEDFDPIRHVLEHVPVEENELTYFEKQAALRLAQLDRVAERLSRH
VMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALL
DMLPTLTELRRALDMQSTLESLVEEGNYWKAFQVLSEYLQLLDSLSELSAIQEMSRGVEV
WLGRTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDTAGLAEKIQSFFMQEVISETHSV
LKAIVHEDEEGLSQNSWLTYSDLCLRIPDSKFRQCLLRTLAVLFDLMCSYHEIMDFQLER
KDSAAQTSNKCNEEISCSPGEPQEVDSDVRACNNSMSSSGDVIHGSSSREESATVSSLTE
TSGSPYSDSHDTIKEAGKEDSATSSIESPWYHLRKEATTFVSQTLQRGRRNLWHLTASRV
SVLLSSATAYTASIHQFLKNYEDLSIFILTGEAFCGIEAVEFRQKLKVVCENYFIAFHRQ
NMHALKMVLEKETWLKLPPDTVQMISFAGLIGDGAPLISLSSGKSTNVSAVHSTKSVNVV
HTGARKNGFSHWIKSGNPFQQKLPTSNEGRGYSQPNGSVCGEFDGSSTNNFHDDKTPRKN
DFNQMNGANSVSEDENEDLLADFIDEDSQLPSRSSQPHHSRTLSSHGNDEENTTQTGSSL
CLLKSMDKYARLMQKLEVVNVEFFKGVCQLFGIFFYFIYETFGQQNGQQNTSSTGKSTTS
SLNYRLRTALSRVNQDCEEWIKSQSSSPTSLGSPFVHTELTPTHPPNTNFGHSSGTSLGL
KERCVAVDTISLVARILNRSKAHLQSMLLQSNSTILEDFYVHLVDAVPDLTEHVHRTTVR
LLLHINGYVERVANCKWEVKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLDY
GLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVALNVKPKLQMVETFIKAY
YLPETEYVHWARAHPEYSKSQIVGLVNLVATMKGWKRKTRLDILEKIE
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaatttgtttccctttggaagcgtgctggggaatcctttcattttcaatggc
gacggcgatttgagcgagggaggaggagggatcgagagctctagggttttcttcttgctc
ccgttcttcttgctctcccagggcggagcaatggatttgtccaaggtcggcgaaaaaatc
ttgagctccgttaggtccgccagatctctcggattgctccctcccgtttctgatcgcccc
gaggttccagctcgagctgctgctgcagctgctgtagctcgtgctcttgcagggttacct
cctcatcagagatacagtctttcttcaagttcagaagaactaagttcaatatatggaagc
atacctcaaggccaagtagtggaggagctggaggatgaattctatgaagaggactttgat
ccaattaggcatgttttagagcacgttccagttgaagaaaatgagctgacatattttgaa
aaacaggctgcccttagattggcacaactggatagagtagctgagcgtttatctcgccat
gttatggagcatcatgaagtaatggtgaaggggatgaatttggtcagagaattggaaaaa
gacttaagaattgcaaatgtcatctgtatgaatggaagaagacacttgacatcatctatg
aatgaggtttcaagggatctgattgtgaattcttattctaaaaagaaacaagctcttctg
gacatgcttccaaccttgactgaacttcgacgtgctttggacatgcaatcaacacttgaa
tcccttgtagaagaagggaattactggaaggcatttcaagtcctatctgagtatttgcaa
ctcttggatagtttgtcagagctttcagcaatacaagaaatgagtcgtggtgtggaggtt
tggctgggaagaactttacagaagctggatgctcttttattgggagtatgccaagaattc
aaggaagatggctatataacagtaattgatgcatatgcattaataggggatactgccggt
cttgctgaaaagatacagagtttcttcatgcaagaagttatatcagaaacacactctgta
ttaaaggctattgtgcatgaggatgaggagggactttcgcaaaatagttggctcacttac
agtgatttatgccttcgaatacctgattcaaagttcaggcaatgcttattacgaacattg
gctgttttatttgaccttatgtgttcataccatgaaattatggatttccagctagaaaga
aaggactcagcagcacaaacttcaaataagtgcaatgaagaaatttcttgtagtccaggt
gagcctcaggaagttgattcagatgtaagagcctgcaacaattctatgtccagttccgga
gatgtaatacatggctcatcttctagggaggaatctgcaacagtgagctcactgactgaa
actagtggttcaccatatagtgattctcatgatacaattaaggaggctggaaaggaggac
agtgcaacatcaagcattgagtccccttggtaccatcttcgcaaagaagctacaacattt
gtttcacagacccttcaaagaggacgcaggaatctgtggcatctcactgcaagtcgtgtg
tcagtattgctttcttctgctacagcctatactgctagcattcatcaattcttgaaaaat
tatgaagatctcagcatctttattttgactggggaagccttttgtggaattgaagcagtt
gaatttaggcagaagttaaaggttgtttgtgaaaactatttcatagcttttcatcgacaa
aatatgcatgctctaaaaatggttttggagaaagagacttggctaaaattacctccagat
acagtacaaatgatcagttttgcaggtcttattggtgatggagcaccgttgatttcttta
tccagtggtaaatcaactaatgtcagtgcagtccattccactaaatcggtcaatgtggtt
cacactggtgcaaggaagaatgggttttctcactggattaaaagtggaaaccctttccag
caaaaattaccaacctccaatgaaggtcgtggttactcacaacctaatggatcagtttgt
ggtgaatttgacggaagttcaaccaataattttcatgatgataaaacacccagaaagaat
gatttcaatcaaatgaatggtgccaattctgtttcagaagatgaaaatgaggatcttctt
gctgactttattgatgaagacagtcaactaccaagtcgaagttctcaaccccatcattca
agaactctctcttcacatggaaatgacgaagagaatacaactcaaactggatcttctctt
tgtcttttaaagtctatggataaatatgcaaggcttatgcagaaattggaagtggtaaat
gttgagttcttcaagggagtatgccaattgtttggaatttttttctattttatatatgaa
acatttggtcagcaaaacggtcagcaaaacactagttcaactggaaaaagcacaactagc
tctcttaattatcgcttgagaacagctttatccagagtaaatcaagattgtgaagagtgg
attaagtctcaatcgtcttcaccaacatctttgggttcaccatttgtacatactgagttg
acacctacacaccctcccaatacaaattttggtcactcctcagggacttctttgggtctc
aaggaaagatgtgtggctgttgacactatatctcttgttgctcgaatactgaatagatct
aaagctcatctccaatcaatgctcttgcaaagtaattcaactatactcgaggatttctat
gttcatctggtggatgctgtaccagatcttacagaacatgttcatcggactacagtgaga
ctactgttgcacattaatggatatgttgaacgtgttgccaattgtaaatgggaagtaaaa
gagctcggcatggagcataacggatatgttgatttgttgctgggggagtttaagcactat
aaaacacgacttgctcatggaggaattcgtaaagaggttcaagacctattattggattat
gggcttgaaattgtggctgaaactcttgttgaaggactttcacgggtgaagagatgtagt
gatgaaggacgagcccttatgtcattagatctgcaggttttgatcaatgggttacagcat
tttgtggcgctgaatgtgaagcccaagctacaaatggttgaaactttcatcaaggcttac
taccttcccgagacagaatatgtgcactgggcacgagcacacccggaatacagtaaaagc
cagattgttggactggtcaaccttgttgccactatgaaaggttggaagaggaaaaccagg
ttggacatactggaaaaaattgaatga
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