Glycine max (soybean): 100788493
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Entry
100788493 CDS
T01710
Name
(RefSeq) flowering time control protein FY isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100788493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100788493
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100788493
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT122_1st
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
DSE1_N
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
CFAP251_N
Beta-prop_NOL10_N
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
eIF2A
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_Vps41
WD40_RFWD3
WD40_like
Beta-prop_HPS5
WD_LRWD1
PAC11
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
100788493
NCBI-ProteinID:
XP_003541596
UniProt:
I1M0T4
LinkDB
All DBs
Position
13:complement(30599615..30612788)
Genome browser
AA seq
713 aa
AA seq
DB search
MMYNDPQQQQQQHQYQQQQQQQHFHHQPPGPEFHRGPLPPSLPPPVMRQGSASSTNLAPE
FHHPGPGGPPPPHYDAHSDIHGAKRIRKLTQRKAVDYTSTVVRYMQIRMSQRDSRDRTVL
QPTSAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGE
FTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAH
KESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLVS
GGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKEL
ESFRGHRKDVTTLAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEISNAHDNNVWDLAWH
PIGYLLCSGSSDHTTKFWCRNRPGDPARDRFNTGMQGYAEQSPVAGRTGGNFPIAEGPTT
PGPFAPGLTRNEGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAPPLPPGPHPSLINA
NQQQPYQQNPQQMPQHQHQALPQQMGSLPMPPNMQQLQHPSHSPFPNMPRPPPQMPIGMP
GSIPGISSVPTSHPMPMPGPMGMQGAMNQMGSPMPQGPYVGMNQMHSGSLPTSGGPPLGG
FPGNLPNMQGPSNANYPQGASFNRPQGGQMPLMQGYNPYQSGNQSGMPPNAQP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacaatgatcctcagcagcagcagcagcagcaccagtaccagcaacaacagcag
cagcagcatttccaccaccagccgccgggtccggagttccaccgcggaccgctgccgccg
tcgcttcctccgccggtgatgcggcaaggctccgcctcgtcgacgaacctcgcccctgaa
tttcatcatcccggccccggaggacccccgcctccccattacgacgctcacagtgatatt
catggtgcaaaaagaatacggaagcttactcaaaggaaagcggttgattatacaagcaca
gttgtgcgttatatgcagattcgtatgtcgcagcgggattcaagggataggacagtactg
caacccacgtcggcagcagcaattgatatgttgccagcagttggctatccagacaatcca
tccacaagctttgctgctaaatttgttcatacatctctaaataaaaatcgttgcccaatt
aatcgtgttctttggactccaacaggccggcgacttattaccggttcacagactggggaa
ttcactctttggaatggacaatcttttaattttgaaatgattcttcaggcacatgatcaa
gcaatcagatccatggtctggagtcataatgacaactggatggtctctggtgatgatgga
ggcgcaataaagtattggcagaacaacatgaacaatgttaaagccaacaaatctgctcat
aaagaatcagtccgtgacttaagtttctgtaggacagatttgaagttctgctcgtgctct
gatgataccacagttaaagtttgggattttgcacgctgtcaagaagagtgttcattaacc
ggccatggttgggatgtgaagagtgttgactggcatcctacaaaatctctattagtatca
ggtgggaaggacaatctagtgaagctttgggatgctaaaacagggagagagctttgttca
tttcatggccacaaaaacactgtgctgtgtgtcaaatggaatcaaaatggcaactgggtg
ctaacagcttcaaaggatcaaataataaagctttatgacataagagcaatgaaggaactt
gaatcgttccgtgggcatcgcaaggatgttactactttggcatggcatccattccatgaa
gagtactttgtcagtgggagttacgatggttccatcttccattggcttgttgggcatgaa
actccacaaattgaaatttccaatgctcatgataataatgtgtgggaccttgcatggcat
cctattggctaccttctgtgcagtggcagcagtgatcatacaacaaagttttggtgcaga
aataggccaggagaccctgctcgtgatagatttaacactggcatgcaaggatatgctgag
caaagtcctgttgctggtcggacaggtggtaattttccaatagctgaaggcccaacaact
ccaggaccatttgcccctgggttgactcgaaatgagggtaccattccaggtgttggagtt
gcaatgcccttatctattccttctcttgacatgcctcaaggggagcagaagcagccccat
cctgtttcaatgggtgctcctcctcttcccccaggtccacatccctccctaattaatgcc
aaccaacagcaaccataccaacagaatcctcagcagatgccacaacatcaacaccaggct
ctaccacagcagatgggttctttgcctatgcctccaaatatgcaacaactacagcaccct
tcccattcacccttcccaaatatgcctcgccctccaccccaaatgcctattggcatgcca
ggatctataccagggatttcatcagtgcctacatcacatccaatgccaatgccaggtcca
atggggatgcaaggggcgatgaatcagatgggttctccaatgccacaaggtccttatgta
ggcatgaatcaaatgcattcaggatccttgcctacaagtggagggccacctcttggtggt
tttccaggaaacttgcctaatatgcaagggccatcaaatgctaattatcctcaaggtgct
tcatttaacagacctcagggtggccaaatgcctctgatgcaagggtataatccttaccag
tctggtaatcaatctgggatgcctccaaacgcacaaccatag
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