Glycine max (soybean): 100788669
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Entry
100788669 CDS
T01710
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100788669
Spliceosome [BR:
gmx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100788669
Complex C
U4/U6.U5 tri-SnRNP related factors
100788669
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Gene cluster
GFIT
Motif
Pfam:
MA3
Motif
Other DBs
NCBI-GeneID:
100788669
NCBI-ProteinID:
XP_003541530
UniProt:
I1M094
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Position
13:28610268..28615728
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AA seq
860 aa
AA seq
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MARRSSSESEDDARKRSGSESEDEERYRYRRRGAENGKKSSGHRDDGHSGEERSGAKRNG
GIRGDRKSTSRDRKEESESSEEEGQIVNKEGVREEKGEDERLRRGGREDEGDGWGGRDSL
PGNDQGERRGKKESHRLHHGDRWRGGEEDRWRFKDCHPHSDSKEEDHRELARKSERDRDR
DRKRKVERGGDNERDRHACHDSDEEDDREFARKSERGRDRDRRRRVEKDGDNERNHREKD
VSRRQEENGKKNDRNGRMVEDANPRRGTIPGGNLNGDVSNLGKSGGVYIPPFKMAMMMKE
VQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQ
MASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVN
QQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFERFRGILHE
GEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEEIDPEISLDIF
KPDPNFLENEKRYEELKKSMLGEESEDDEEGLDAESDDDDEDDDSDEEDEEEMQIKDETE
TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGL
LGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR
LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDLTMQESFESIFPKDNPKNTRFCIN
FFTSIGLGGLTENLREYLKNMPRLIMQQQKQVSESESDDESGSSDSSDSGSASSESDSDS
ASSDETDRASDRRQRKRRRK
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaagaagcagcagcgagtctgaggatgacgcgaggaagcgcagtggcagcgaa
tctgaggatgaggagaggtataggtatcggcggcgcggtgctgagaatggtaagaagagt
tccggtcaccgtgatgacggtcattcgggggaagaacgaagcggagccaagaggaatggt
ggaatccgaggtgataggaaaagtacgagtagggacagaaaggaggagtctgagagctct
gaggaggagggtcagattgtgaacaaagaaggggttagggaagagaagggagaggatgag
agattgcggcgtggagggagagaagatgaaggagatggctggggtggtagggattctctt
ccagggaatgaccagggtgaaaggcgggggaagaaggagagtcacagattgcatcatggc
gatagatggcgtggaggtgaggaggacagatggagatttaaggattgccacccgcatagt
gattcgaaggaggaggatcacagggagctggccaggaaatcagaaagggatagagatagg
gataggaagcggaaagttgaaaggggtggagacaatgagagggatcgccatgcatgtcat
gattcggatgaagaagatgatagggagtttgctaggaaatcagagaggggtagggatagg
gataggaggcgtagagttgaaaaggatggtgacaatgagaggaaccacagggagaaggat
gtgagcaggcggcaagaagaaaatgggaagaaaaatgacagaaatggaagaatggttgaa
gatgcaaatcctcgacggggaacaataccgggaggtaacttgaatggtgatgtatctaat
ttgggcaagagtggaggtgtttacattcccccctttaagatggcaatgatgatgaaagaa
gttcaggataaaagtagtgtagaatatcaaaggttaacgtgggatgctctgagaaagagc
attaatgggcttgtaaataaggttaatgctactaatataaaaaatattattccggaattg
tttgcggaaaacctgatcaggggaaggggactcttttgtcggtcgtgtatgaagtctcag
atggcatctccgggatttacggatgtttttgctgccttggttgctgttgttaataccaag
tttcctgaggtgggggatcttttgctaagaaggattgttttgcagcttaagagagcttat
aagcgaaatgacaagcctcaattactagcagctgtcaaatttatagcacatctggtgaat
cagcaagcagctcatgagatcattgctctagagttactcacagttttactcgagaaacct
actgatgacagtgtggaagtagctgttggttttgtcacagaatgtggttcaatactgcag
gatctctcacctaaaggccttcatggtatctttgagcgttttcgtggaattcttcatgaa
ggagaaattgacaaacgtgttcagtttctgatagaaggcttatttgcaataagaaaagcg
aaatttcagggctatccagctgttcgtcctgaactggatcttgtggagcaggaagatcag
ataactcatgaagtctccttggatgaggagatagatccagagatttcccttgatatattc
aagccagaccccaatttcttggagaatgagaagcgttatgaagagttgaagaaatcaatg
ctgggtgaggagtctgaggatgatgaggaaggcttggatgctgagtcagatgatgacgat
gaagatgatgactctgatgaagaggatgaagaagagatgcaaataaaagatgaaacagag
acaaatcttgttaatcttcgaaggacaatatacttaacaattatgtctagtgttgatttt
gaggaagctggtcataagcttctgaaaattaagctagagccgggtcaagagatggaattg
tgcattatgcttttggaatgttgcagccaagagagaacttatcttcgatattatggtctt
ctggggcagcgtttctgcatgatcaacaaagtacaccaagaaaattttgaaaagtgtttt
gtgcagcagtactcaatgattcaccgacttgaaacaaataaactgcgaaatgtggcaaag
ttttttgctcatttacttggcacagatgctctaccttggcatgttttatcttatatacgc
ttgactgaagaggacacaacttcttcttcacgtatatttattaagattctcttccaggaa
ttatcagaacatcttggaatccgactgctaaatgagcgattaaatgatctaacaatgcaa
gaatcttttgaatccatatttccaaaagataatccaaaaaacacacggttctgcattaac
ttctttacatctattggtcttggtggtcttaccgagaacctacgtgagtatttgaagaat
atgccacgtcttatcatgcaacaacagaaacaagtttcagaatctgaatcagatgatgag
tcagggagttctgattcatcagattctggatcagctagttcagagtcagactcagactca
gcaagttctgatgaaactgaccgtgcgagtgacagaagacaaagaaagcggaggagaaag
tga
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