Glycine max (soybean): 100788931
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Entry
100788931 CDS
T01710
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmx03009
]
100788931
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
90S particles
Other 90S particles
100788931
Pre-60S particles
Other pre-60S particles
100788931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
MMS19_N
DUF4290
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
100788931
NCBI-ProteinID:
XP_014625453
UniProt:
A0A0R0FIJ6
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All DBs
Position
17:3513665..3524037
Genome browser
AA seq
1280 aa
AA seq
DB search
MESIEMEEAAFGIDESNDDLCSSILSRFANSTDETHQHLCAVIGAMSQELKDNNQPSTPF
AYFCAARVSLDKFTSEPNPPSHVIDALLTILSLALPRVPLELLKKQNSQQGEPFSELLLR
VLRSPSSASETALVSGLKCLSRLLIARESVDWSDVSPLFNVLLGFLTDSRPKVRRQSHLC
HRDVLLNFQNSSLLASASEGVTNLLERFILLVGGAKANAGEGAKEAQQILYILDALKECL
PFLSRKSKTSVLNYFKYLLDLHQPLVTRRITDGLNFLCHYPTSEVSPEALLELLNSLARS
IESNKMSGDRLTFTARLLDAGMNKVYSLNRQICVVKLPVVLNALKDILASEHEEAIYAAT
DALKSMINSCIDESLIKQGVDQISLSESNESRKSAPTIIEKICATIESLLDYHYTAVWDR
VFQIVSAMFHKLGNNSPYFMRGILKNMEDVQKLPDEDFPFRKQLHECFGSALVAMGPEIL
LSLIPLNLEAEDSSDANVWLFPILKHYIVGAPLNYFTEEILTMIKRVREKAQKLEKQGLM
VSSRNADALAYSLWSLLPSFCNYPSDTAQNFMNLEKHLRSKLKEEPDICGIICTSLQLLI
QQNNIVDSKDKGYMGEDMSKEQILVHYSQQVARDNLYVLKLSARHWLKDLSEVFLKSSKD
DGGCLQRTIGDVASIADKVDVRNLFKEKMLKLYKCTRKASKVGSSKNSHSMQIDDASNNL
SPSILRAQLLDLAVSLLPGLDAEDIALLFEAIKPALQDAEGVMQKKAYKVLSIILRSSSN
DFVSSKFEELRQTMVEVLPCHFSAKRHRLDCLYFLIVHVSKSKADMEHWRDIFLTEIILA
LKEANKKTRNRAYDILVEIARAFVDEERGGNRESLNNFFQMVAGHFTGETPHLISAAAKG
LARLAYEFSDLVLTAFKLLPGTLTLLRSDNKEIIKANLGFLKVLVAKSQAEGLQMHLKSM
VEGLLKWQDNSRNHFKAKVKLLLGMLVTKCGLEAVKAVMPEEHMKLLSNIRKIKERKERN
RSAKSEETRSHFSKATTSRQSLWNHTKIFSDFDGDSGNSNAEYMISRGSKAFLHPKSAAS
SFRSNIRLKKNLPEHLSDQSDDEPLDLLDRKKTRSALKTSEHLKRKSRLDDEVEVDSEGR
LIIHEEGEWKKEKHADDDFDSRSERDSHISAKSGTTGQKRRKTSDSGWAYTGKEYASKKA
GGDVKRKDKLEPYAYWPLDRKMMSRRPQQRAAARKGMASVVKMTKKLEGKSASGVLSINS
LKPRRTHKKGSKENKKAARA
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcattgaaatggaggaagccgcattcggcatagacgaatccaacgatgacttg
tgcagttcgatcctctctcgcttcgctaactccaccgacgaaacccaccaacacctctgc
gccgtcatcggcgccatgtcgcaggagctcaaagacaacaaccaaccttccacacccttc
gcctacttctgtgccgcacgcgtctctctcgacaaattcacctccgaacccaatcccccg
agccacgtcatcgatgcgcttctcaccattctctctctcgccctccccagagtacccctc
gagctgctcaagaagcagaattcgcagcagggagagccgttctcggagctccttcttcga
gttctccgttctccgtcgtcggcgtccgagactgcgcttgtttccggattgaagtgcctc
tcgcgtctgttgatcgccagggaaagtgtagactggtctgacgtgtctcctttgttcaat
gtattgttagggttccttactgattcgcgacctaaggtcagaaggcaatctcatttatgt
catcgtgatgtcttgttaaactttcaaaattcctcactactggcatctgcgagtgaggga
gtaacaaacctactcgaaaggtttattctgcttgttggtggagcaaaggcaaatgctggt
gaaggagctaaggaggctcagcagattctgtatattcttgatgccttgaaagaatgtctt
ccttttttgtcacggaagtctaagaccagcgttcttaattacttcaaatatctcttggat
ctgcatcaacccttagtcacaaggcgcataacagatggtttgaattttctttgtcattat
ccaacatcagaagtttcccctgaagcactacttgagttgttaaactcattggctcgttct
atcgaatcaaataagatgtctggagacagattgacatttactgcccgcttgcttgatgct
ggaatgaataaagtttattctcttaaccggcaaatatgtgttgttaagcttcccgttgtc
cttaacgctctcaaagatatcttggcatctgaacatgaagaggctatatatgcagccact
gatgccctcaagagcatgataaattcttgtattgatgaaagtttgattaaacagggagtg
gatcagatcagtttgagtgaaagcaatgaatcaaggaagtcagcaccaaccatcattgaa
aaaatttgtgcgactattgagagcttacttgattatcattatactgctgtctgggataga
gtatttcaaattgtttcagccatgtttcataaattaggaaataattctccttattttatg
agaggaatactcaaaaacatggaagatgtgcagaagcttcctgatgaagattttccattt
aggaaacagctgcatgaatgcttcggatcagctcttgttgcaatggggcctgaaattctg
ctgtctcttatacctctaaatttggaagctgaagattcatctgatgcaaatgtctggctt
tttccaattctaaaacattatattgttggtgcacctttaaattattttacagaagaaatt
ctgactatgattaagcgtgtaagggagaaggctcaaaagcttgagaagcaaggattgatg
gtgtcatcaaggaatgcagatgcacttgcatactctttgtggtctctgctgccttctttt
tgcaactatccttcagacactgctcaaaatttcatgaatctggagaaacatttacgtagt
aagctgaaagaagaacctgatatctgtggaataatatgcactagtttgcaacttcttatt
cagcaaaacaatattgtggattctaaagacaagggttatatgggtgaagatatgtccaaa
gaacaaattctggttcattattcacagcaggttgcaagagacaatttatatgtgctgaag
ttatctgcaaggcattggttaaaagatctttccgaagtattccttaaatctagcaaagat
gatggtggttgtttgcagcgtacgattggtgatgttgcttctatagctgataaagtagat
gtacgcaatttattcaaggagaaaatgttgaagctttataaatgcacacgaaaggccagc
aaagtaggcagttccaaaaattctcattctatgcagattgatgatgcatcaaacaatttg
tccccatcaattttaagggcacagcttcttgatttggcagtttcactgttgcctggttta
gacgctgaagatattgctctattatttgaagcaataaagccagcattgcaggatgctgaa
ggtgtcatgcagaagaaggcatacaaagtactttcgatcattctgaggagctcctccaat
gattttgtttcatcaaagtttgaggagttgcgtcaaactatggttgaagttcttccgtgt
catttttctgccaaacgccatagacttgattgcctttacttcttaatagttcatgtctca
aagtccaaggctgatatggagcactggcgagacattttccttactgaaattatacttgct
cttaaagaggctaataaaaaaaccaggaacagagcttatgatattcttgtcgaaattgcc
cgtgcatttgtggatgaagagagaggtgggaacagagaaagcttgaataatttttttcag
atggttgctggacactttactggggaaactccacatctgataagtgcagcagccaaaggt
ttagcccgtttggcttatgagttctctgatcttgttttaactgccttcaaattgctccca
ggcacacttactctcctgaggagtgataataaagagataatcaaggccaatcttggtttt
ttgaaggtattagtagccaaatcacaagcagaaggcttgcagatgcacttgaaaagcatg
gtggagggtttgttgaagtggcaagacaactcaagaaatcattttaaggctaaggttaaa
cttcttttgggaatgcttgtcacaaagtgtgggcttgaggctgttaaagccgtcatgcct
gaagaacacatgaaacttctttccaacatacgcaagatcaaggagcgaaaagagaggaat
cgaagtgctaaatcggaagaaactagatctcatttttcaaaagcaaccacatccagacaa
agcttgtggaatcatacaaagattttttcggattttgatggggatagtggcaatagcaat
gcagaatacatgatttctagagggagcaaggctttcttacatccaaaatcagcagcatct
tcatttaggtccaatatcagactgaagaagaatttgcctgagcacttgtctgaccaatca
gatgatgagccacttgatttgcttgatcggaagaaaacaaggtcagctcttaaaacgtct
gagcatcttaaaagaaagtcaaggttagatgatgaggtggaggtagattcagaaggacgt
ctgattatccatgaggaaggggaatggaagaaggaaaaacatgcagatgatgattttgat
tctaggagtgaacgtgatagtcacatatctgccaagtctggaactacaggccagaagcgg
agaaaaacatctgattccggttgggcatacacagggaaggaatatgctagcaaaaaggca
ggtggagatgtgaagaggaaggacaaacttgaaccgtatgcatattggccactggatcga
aaaatgatgagtcggcgaccacaacagcgggctgctgcaagaaaaggtatggctagtgtt
gtaaagatgaccaaaaaacttgaaggaaaaagtgcctctggtgtgctgtccataaacagc
ttgaaaccaagaaggactcacaagaaaggcagcaaggaaaataaaaaagcagcgcgagcg
tag
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