Glycine max (soybean): 100789058
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Entry
100789058 CDS
T01710
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100789058
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmx01009
]
100789058
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100789058
03036 Chromosome and associated proteins [BR:
gmx03036
]
100789058
Protein phosphatases and associated proteins [BR:
gmx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100789058
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100789058
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100789058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
100789058
NCBI-ProteinID:
XP_003529950
UniProt:
I1KGE9
LinkDB
All DBs
Position
7:924994..932888
Genome browser
AA seq
514 aa
AA seq
DB search
MNGGDEVVAAPAGPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGG
RVVLFERTDTKDHHGSRRDLERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSDMNVDPKAMGNGSIASSSNSSSSKS
YLANGVSPDGPYNYLNNDFSFPPEGVPSLRLPLVTSHETSLVARCRRVYAHAHDYHINSI
SNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLA
YSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSR
DYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVSTGSYS
NLFRVFGCVPGSTEAMTLEASKNPMRRQVPTPSRPSRSLGNSITRVVRRGAESASVDANG
NSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatgaggtcgtggcagctccggcgggtccaccgcagccgctggagtgg
aaattctcgcaggttttcggggaacgtacggcgggggaggaagttcaggaagtggatata
atttctgctattgaatttgacaagtctggtgatcatcttgctactggtgatcgtggtggt
cgagtagttctctttgagcggacagatacaaaagatcatcacggatcaagaagggacttg
gagaggatggactattctattagtagacatcctgagttccgttataaaacagagtttcag
agtcatgagcctgagtttgactatcttaagagtctggaaatagaagagaaaattaacaaa
atcaaatggtgccaaacagctaatggtgctttgttccttctatccacaaatgataaaacc
atcaaattttggaaggttcaagaaaagaaggtcaagaaagtttctgacatgaatgttgat
cctaaagcaatgggaaatggctctattgctagttcaagtaattccagtagctccaaatca
tatcttgcaaatggagtatctccagatggaccatacaattatttaaacaacgatttctca
tttccaccagaaggcgtaccttctctaagattaccattggtaaccagccatgagaccagt
ttggtggctcgatgtcgtagagtatatgcccatgctcatgattatcatattaattctatt
tcaaataacagcgatggagaaactttcatatcagctgatgatttacgaataaatctttgg
aacctggaaattagcaatcaaagttttaatattgttgatgtaaagcctgcaaatatggag
gatctgactgaggttataacatcagcagaatttcaccctacacattgtaatacattggca
tatagcagctcaaagggttcaattcgtcttgttgacttgcggcagtcagcattatgtgat
tctcatgccaaactatttgaggaacaagaagcccctgggtcacgatcatttttcacagag
attattgcctcaatctcagacataaaatttgggaaggatggaagatatatacttagtcgt
gattacatgaccttaaagttatgggacatcaatatggattctggtccagttgcaacattc
caggttcacgagtatttaaggccaaagctttgtgatttatatgaaaatgattcaattttt
gataagtttgagtgttgtctaagtggtgatggattgcgtgtttcaactggttcttacagc
aatctattccgtgtgtttggttgtgttcctggaagtactgaggctatgactttggaagcc
agtaaaaatccaatgaggcgtcaagttccaaccccttcaaggccatctagatcactggga
aacagtataacaagagttgtaagacgtggagcagaaagtgccagtgtcgacgcaaatggg
aattcttttgatttcacaacaaagttgctgcacttagcatggcacccaactgagaattca
attgcttgtgctgctgcaaatagcttatacatgtactatgcttaa
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