Glycine max (soybean): 100789177
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Entry
100789177 CDS
T01710
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100789177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100789177
03036 Chromosome and associated proteins [BR:
gmx03036
]
100789177
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100789177
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100789177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
100789177
NCBI-ProteinID:
XP_003539631
UniProt:
I1LVB2
LinkDB
All DBs
Position
12:40859820..40867508
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AA seq
1007 aa
AA seq
DB search
MFGSNPFGQSSSSPFGSQSVFGQTNSSSNPFAPKPFGSTAPFGSQTGGSIFGGTSTGVFG
TAQPASPFGASSSPAFGSSQPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFGGFGSTPTQT
SPFGAAQPSQPAFGSSIFGSSTPFGASSQPAFGATSTPAFGATSTPAFGATSTPAFGATS
TPAFGATSTPAFGATSSPAFGATSTPAFGSTSSPTFGSTGSAFGVSSTPVFGSGGAFGAS
SNPMFGSSSTSAFGTSSSPFGASSTPAFGASSTPAFSFGSTPQAFGQSSSAFGNSSPFGS
TASPFGGQSSAFGSQTPTSTFGNTGGQSGFGGQQRGGSRVASYTATTEADSGTSGQTAKL
ESISAMPIYKDKSHEELRWEDYQLGDKGGPLPSALSTGLTGFGSSTTPTNAFSPSPVFGQ
SSANPFSSTTPNSNPFAPKSSPFSSGFGTSATPAFSSSAFGSSTSAAAPSLFGSTPSPFG
ANSSSTPSFGQSPSLFNTAPTQATSSPFGNSIFGNTLSSPLFSSAAPTGGQTASAFGQNT
SPFGQTTTPSFSQPSLFNSPSSGLVGSIFSSSAPLTSNNLTGFGQTALSISTPFQSAQPA
QSSGAFGFGNFGQTQPVGASSFGGTPGMFGQNNFGLVSSTPLSSVAVQAVPNTNPFGTLP
ALPQMSIGRVGTTPSIQYGISSMPALDKPAPVRISSLLTSRHLSQRRIRLPVRKYHSKND
GPKVAFFSDDEDTPTTPKADALFIPRENPRALIICPVEQWPGKASEKASTFKDRSIPVNE
NESAVENGFVKEQAQPISTKPTSNGSNEDHSPQKADVYKTLRGHRAGEAAIVYEHGADVE
ALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKDFVVGRQGYGSIRFLGETDIRGLDL
ESLIQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGHQYTEGPKIEKYKE
MLKRKTEDQGAEFVSYDPTKGEWKIRVSHFSIYKLVEDENSRINDDN
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttcaaacccttttgggcagtcatcgtcgagccctttcggctctcaatcggtt
tttggacagaccaattcgagtagcaatccttttgctcctaagccgtttggtagtacagct
ccatttggttcgcaaaccggtggttccatatttggaggtacgtccactggggtgtttgga
acagctcaaccggcttctccgttcggtgcttcatcttcaccggctttcggtagttcacaa
cccgcttttgggtcatcttcaactcctgcttttggtagttcatcgtcatcgtttggtgga
tcgtcggtttttggtcagaagcctgcctttggaggctttggatctactcctactcaaaca
agtccatttggtgccgctcagccatcacaaccagcttttggaagcagcatatttggttcc
tcaacgccttttggtgcatcatctcagccagcatttggtgcgacgagcactccggcattt
ggtgctacgagcacccctgcatttggtgcaacgagcacccctgcatttggtgcaacaagc
acccctgcatttggtgcaactagcacccctgcttttggtgctacaagcagtcctgcattc
ggtgcaactagcacccctgcatttggttcaacctcaagtccaacttttggtagcacaggg
agtgcatttggggtgtcaagtactcctgtatttggtagtgggggggcatttggggcttca
agtaaccctatgtttggttcatcaagtacatctgcgtttggcacttcaagcagtccattt
ggggcctctagtactcctgcttttggggcctctagtaccccagcatttagttttggatcc
actcctcaagcttttggtcaatcgtcttctgcatttggtaacagcagcccatttgggagt
acagcctcaccctttggaggtcaaagttcagcgtttggatcccaaactccgacatcaact
tttggaaatactggtgggcagtcaggttttggaggtcaacaacggggtggaagtagagta
gctagttacacagcaacaactgaagcagatagtggtacctctggacagactgcaaaattg
gagtccatatctgccatgcctatttacaaagacaaaagtcacgaggaactaagatgggag
gactatcaattgggagataaaggtggaccacttccctctgcgctgtcaaccggattgaca
ggctttggttcgtctacgacaccgacaaatgccttttctccttcaccagtgtttggtcaa
tcatcagccaatcctttctctagcacaacacctaattctaacccttttgcgccaaagagt
tcacctttttcttctggatttggaacttcggctactcctgcattcagttcatcagctttt
ggttcttcaacatcagcagcagcaccttctctttttggctcaaccccatctccatttgga
gccaactcttcttcaacacccagctttgggcaatctccatccctgtttaatactgctcct
actcaggctacatcttcaccatttggcaatagcatttttggcaacacactgtcatcccca
ttatttagttctgcagcccctacaggtggacagacagcttctgcttttggacagaataca
tccccctttggacagactactacaccttctttcagtcaaccaagtttgttcaattcacct
tcttctgggcttgttggaagtattttctcatcaagtgcaccactcacttctaataatctt
acaggttttggtcaaacagcgctgtccatttcaacaccttttcaatctgcacaacctgct
cagtcgagtggtgcttttggctttggcaactttggccagacacaacctgttggtgcaagc
agcttcggtggcactccaggaatgtttggtcagaataattttggacttgtgtcttctacc
cccctgagttctgtggctgtacaagcagttccgaatacaaatccatttggaacacttcct
gcattgcctcagatgtcaattggtcgagttggaactactccttcaattcaatatggaatc
tctagcatgcctgccctagacaaacctgctcctgttagaatatcgtctttattgacatct
cggcatctctcacaacgacgaataaggcttcctgtcaggaaatatcattctaagaatgat
ggtccaaaggttgcattctttagtgatgatgaggatactccaacaacacccaaggctgat
gctctgttcattcctagggaaaatccaagggcgttgataatttgtcccgtggagcagtgg
ccaggaaaggcttctgagaaggcatcaacatttaaggatagatccatcccagtgaatgag
aatgagagtgctgtagaaaatggttttgtcaaggagcaagctcagcctatatcgacaaag
ccaacatccaatgggagcaatgaagatcattctccacaaaaggcggacgtgtacaagaca
ctcagaggtcacagagctggtgaggctgccattgtatatgaacatggagctgacgttgag
gcactaatgccaaaactgcggcgatctgattactacacactgcctcggatacatgaactg
gcagccaaagaaagagctgaacctggattctgcagtcatgttaaggacttcgtggttgga
aggcaaggttatggcagcatcagattcttgggtgagacggacatacgagggctcgatctc
gagtccctcattcagtttaacaaccgggaggtgattgtatacatggatgattcaaagaaa
ccccctgtgggacaagggctgaataagcctgctgaggttacactactcaacataaaatgt
ttcgacaaaaaaactggacatcagtatacagaagggccaaagatcgagaaatacaaggag
atgctcaagagaaagactgaggaccaaggtgctgaatttgtatcatatgatcccactaaa
ggagagtggaagatcagggtcagccatttcagcatctacaagctggtagaagatgaaaac
agtcggataaatgatgacaactaa
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