Glycine max (soybean): 100789209
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Entry
100789209 CDS
T01710
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmx01009
]
100789209
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100789209
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100789209
Protein phosphatases and associated proteins [BR:
gmx01009
]
HAD phosphatases
Fcp/Scp phosphatases
100789209
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100789209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
100789209
NCBI-ProteinID:
XP_003542763
UniProt:
I1M0C8
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All DBs
Position
13:complement(28903812..28913946)
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AA seq
960 aa
AA seq
DB search
MYKSVVYQGEVVVGEVDVYPEENNNNNNKNYNKNFHVKEIRISHFSQPSERCPPLAVLHT
VTSCGVCFKMESKTQQQDGLFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRNDDRPCFWG
FIVTLGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRIS
GMQAEVKRYLDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIRLQDKN
IILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP
DSNLINSKELLGRIVCVKSGLKKSLFNVFQDGSCDPKMALVIDDRLKVWDERDQPRVHVV
PAFAPYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDVPS
PPDVSNYLVSEDDGSISNGNRDPFLFDGMADAEVERKLKDALAAASTFPVTTANLDPRLT
SLQYTMVPSGSVPPPTAQASMMPFPHVQFPQPATLVKPMGQAAPSDPSLHSSPAREEGEV
PESELDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQASAPRVPSSRGVWFPVEEEIG
SQPLNRVVPKEFPVDSGPLGIEKPRLHHPSFFNKVESSISSDRILHDSHQRLPKEMYHRD
DRPRLNHMLSSYRSFSGDDIPFSRSSSSHRDLDSESGHSVLHADTPVAVLHEIALKCGTK
VDFMSSLVASTELKFSLEAWFSGKKIGHGFGRTRKEAQNKAAKDSIEHLADIYLSSAKDE
PGSTYGDVSGFPNVNDNGYMGIASSLGNQPLSKEDSASFSSASPSRALDPRLDVSKRSMG
SISALKELCMMEGLGVNFLSTPAPVSTNSVQKDEVHAQVEIDGKIFGKGIGLTWDEAKMQ
AAEKALGNLRSKLGQSIQKMQSSPRPHQGFSNKRLKQEYPRTMQRMPSSARYPRNAPPIP
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcggtggtgtaccagggggaggtggtggtgggtgaggtagatgtataccca
gaagagaacaacaacaacaacaacaagaactacaacaagaacttccatgtgaaggaaatc
agaataagccacttctcgcaacctagtgagagatgtcccccacttgctgtgcttcacact
gttacctcatgtggtgtttgcttcaaaatggagtcaaagactcagcagcaggacggcctc
tttcaattgcactccttgtgtatcagagagaacaagactgctgtaatgccactgggtggg
gaagaaatacatttggttgcaatgcattctcggaatgatgatagaccatgcttttgggga
tttattgttaccttgggactttacgattcatgtctcgtgatgctaaatcttagatgtttg
ggtatagtgtttgatctggatgaaacactcattgtagcaaacacaatgcgatcatttgag
gatagaattgatgcactccagagaaaaataaactctgaggtagatccacagcgaatttct
ggtatgcaggcggaggtcaagcgctacctagatgacaagaatatattgaagcaatatgct
gaaaatgatcaggttgttgataatgggagagtgataaaagttcaatctgagattgttccg
gcattatcagacagtcatcagcctatagttcggccactgatccggttacaggataagaac
attattctgacacgcatcaatccacagattcgtgatacgagtgttcttgtgaggttgaga
cctgcatgggaagatcttcggagctaccttactgcaagaggacgcaagcgttttgaggtt
tatgtctgcacaatggctgaaagggactatgcactagaaatgtggagacttcttgatcca
gattcaaatttgataaattctaaagaactattaggtcgcattgtatgcgttaagtctggt
ttgaagaagtcattgttcaatgtcttccaagatggttcatgtgatccaaagatggcattg
gtaattgatgatcgcttgaaagtgtgggatgagagggatcaacctcgggtgcatgttgtt
cctgcatttgctccatactatgctcctcaagctgaagcaagcaatactatccctgttctg
tgtgttgcaagaaatgttgcttgcaatgttaggggtggcttctttaaggattttgatgat
ggtcttttacaaaagattcctcaaattgcatatgaagatgatatcaaagatgtaccttct
cctcctgatgtgagcaattatctagtttcagaggatgatggttctatttccaatggaaac
agagatccgttcttgtttgatggcatggcagatgctgaggtagaaagaaaattgaaggat
gcactagcggcagcttcaactttccctgtgacaactgctaatctagatcccaggctcact
tctcttcagtacacaatggtgccttctggttcagttcctcctccaacagcacaagcatct
atgatgccatttccccatgtacagttccctcaacctgctacactagtaaagccaatgggt
caagctgccccttccgatcctagcttgcatagctctcctgctagagaagaaggtgaagta
cctgaatcagaattagatccagatacaaggcgtaggcttctcatattgcaacatggacaa
gataccagggatcatgcatccgctgagcctccatttcctgttagacatcctgtgcaagcc
tctgctcctcgtgttccatcatcacggggggtttggtttcctgtagaagaggagattggt
tcacagccactaaaccgggtagtacctaaagaatttcctgtggattctggtccattgggt
attgaaaagccccggcttcatcatccatcctttttcaataaggttgaaagttctatttca
tctgatagaattctccatgacagccaccaaagattaccaaaggagatgtatcacagagat
gatcgccccagactaaatcatatgctctctagttatcgttctttttctggtgatgatatc
ccctttagtaggtcatcttccagccacagggatcttgactctgaatctggccattctgta
ttgcatgcagatactccagttgcagtattgcacgaaattgcactgaagtgtggaactaag
gtggactttatgtcatctttggttgcaagcactgaactgaagttctccttggaggcatgg
ttttctggaaaaaaaattggtcatggatttggcaggactaggaaggaagctcaaaataag
gctgctaaggattctatcgaacatttggcagatatatatttgtctagtgccaaggatgag
cctggttccacatatggcgatgtgagtgggtttcccaatgtaaatgacaatggttacatg
ggtattgccagctctcttggtaatcaaccattgtctaaagaggattcagcttcattttca
tctgcatctccatcaagagctttagatcctaggttagatgtctctaagaggtcaatgggt
tcgatctctgccctgaaagaattgtgcatgatggagggtcttggtgtcaattttctatct
acacctgctccagtgtcaacaaattcagttcaaaaagatgaagtacatgcacaggtcgaa
atagatggcaagatctttggtaaaggcattggattaacatgggatgaggctaaaatgcag
gctgccgagaaggcacttggaaatctaagatcaaagcttggccaaagcattcagaaaatg
cagagctctcccaggccccatcagggattttcaaataagcgtttaaagcaagaataccct
cgaacaatgcagcggatgccctcatcagctcgatatcccaggaatgctccaccaattcct
tga
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