Glycine max (soybean): 100789303
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Entry
100789303 CDS
T01710
Name
(RefSeq) probable pectate lyase 18 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100789303
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100789303
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
SRTM1
Motif
Other DBs
NCBI-GeneID:
100789303
NCBI-ProteinID:
XP_006589707
UniProt:
I1LEZ6
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Position
10:complement(50010877..50015622)
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AA seq
504 aa
AA seq
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MLPITCILFMCLLSSFSPPINALLNLNLTLPHQYPHPESVVQDIQRKVNASLRRREMLSK
DEQQGMSSCLTGNPIDDCWRCEPNWAAERQKLAECGLGFGKYAMGGKGGQIYIVTDSSDR
DPANPIPGTLRHAVIQDEALWIVFAADMTINLKHELIFNSYKTLDGRGANVHVTGHGCIT
LQYVSNIIIHNIHIHHCTPSGNTNIRASPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSY
CTDGLIDAIMGSTGITISNSHFAHHDEVMLLGHDDKYLVDRGMQVTIAFNHFGEGLVQRM
PRCRLGYIHVVNNDFTQWRMYAIGGSANPTINSQGNRYTAPGDPDAKEVTKRVDTDDREW
SGWNWRTEGDIMVNGAFFVPSGAAGQSGQYQEATSVQAKSAVQIDQLTMYSGVLGDPRDN
GDLYPGFNGGGTVTGATSKGNTDGSSSDDGGDFFGMIFRGGSSSSSSSQAAPPSSVLFVS
IFLSLLIIFVLDTTTNHAFLLSLL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgctccccatcacctgcattctttttatgtgccttttaagttccttctcacccccaatc
aacgctcttctcaacctcaacctcaccctgccccatcaataccctcaccccgaatccgtc
gtccaagatatccaacggaaggtgaatgcctcactacggagaagggaaatgctgtcaaag
gacgaacaacaaggcatgtcttcgtgtctgacaggaaaccccatcgacgactgctggcgg
tgcgagccgaactgggcggcggagcggcagaagctggcggagtgcggcctcgggttcggc
aaatacgccatgggcggcaaaggcgggcagatctacatcgtgacggactcctcggaccgc
gaccctgccaaccccattccgggcaccctccgccacgccgtcatccaagacgaggcactc
tggatagtcttcgccgccgacatgaccatcaacctaaaacacgagctcatattcaacagc
tacaagaccctggacggccgcggagccaacgtccacgtcaccggccacggctgcatcacg
ctccagtacgtctccaacatcatcatccacaacatccacatccaccactgcactccctcc
gggaacaccaacatacgagccagtccaacgcacgtagggtggagaggcaaatcggacggt
gatgggatttcgatttttggctcgcggaagatctggatcgaccattgctcgctgtcttat
tgcacggacggcttgatcgatgctattatggggtccactgggattactatttcgaatagt
cattttgcgcaccatgatgaggtgatgcttcttggacacgatgataagtacttggtggat
aggggcatgcaggttacaatcgcgtttaatcacttcggcgagggtttggtgcagcgcatg
ccacgatgcaggctcggttatatccacgtcgttaataatgacttcacgcagtggaggatg
tatgctatcggcggtagcgctaaccccaccatcaacagccagggcaaccgttacacggct
cccggagaccctgatgccaaggaggtgacgaagcgcgtggacacagacgatagagagtgg
agtggttggaattggaggacggaaggggacataatggtaaatggagcgttctttgtacca
tcgggtgctgcggggcagagtggccagtaccaagaggccaccagtgtgcaagccaaatcc
gccgtgcaaattgaccagctcactatgtactccggtgtcttgggtgatcccagggataat
ggggatttatatcccggcttcaacggcggtgggaccgtgaccggagccaccagcaaaggc
aacactgacgggtccagcagtgacgatgggggggacttcttcgggatgatattcagaggt
ggcagcagcagcagcagcagcagccaagcagcgccaccatcgtccgttctatttgtttca
atctttttgtctcttttaattatttttgttttggacactaccaccaaccatgccttttta
ttatcattactatga
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