Glycine max (soybean): 100789372
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Entry
100789372 CDS
T01710
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X2
KO
K10683
BRCA1-associated RING domain protein 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100789372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100789372
04121 Ubiquitin system [BR:
gmx04121
]
100789372
03036 Chromosome and associated proteins [BR:
gmx03036
]
100789372
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100789372
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100789372
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100789372
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100789372
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100789372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
BRCT
BRCT_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-HC5HC2H_2
zf-RING_6
zf-RING_10
PHD_NSD
zf-rbx1
YfhD
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
100789372
NCBI-ProteinID:
XP_003541671
UniProt:
A0A0R0GS35
LinkDB
All DBs
Position
13:complement(32778327..32783514)
Genome browser
AA seq
979 aa
AA seq
DB search
MGDLERMAIELKCPICWSLLDSAVSLTCNHLFCNSCIFKSMKSASACPVCKIPFTRREVR
PAPHMDNLVSIYINMEASSGVNTFVTQNAPVTNLSDGEKECEGDADSGKMKAGGTHEGRP
QEKKTRKKKKSKKTVQASMESSGSEFAKPSFPAKKRVHVPQNLLSETPMKNLKIGDSLSE
INKEKEGTEKVPVKESERPLQSEKDNPVLSPFFWLREEKDGEMLSQQTDEDQIIDGSTPN
PPSFSDLKDSDDEVHSNVDLMDEVQNKSSVNLFDSEMFEWTQRPCSPELFSSPSKMQVMD
TYEDDENQEELVASSLELEANLPRVDADNMEFENPKEGNRMADEVPPSVCFPQIRSSDDL
NGIKKSTKRRKARDKNKQEQIGEPKNSFDEMYVEVTQEQALDNSSNLGKGSRRGKRVCFN
TSPIPTPITACTVPNTLGVQSIGEMKKAKNIDILPCKQENEKHYAQEISGKSQMKISGKQ
NINQMNEFAGSDSSIFSLRTDNNGKDSNRRQCKSKYSRKTIYCSKELETTKRQKLSSACI
SKTKNNEEILPIESIHQGPDVRDLNDTSKEKHCPLMDQTVLRKCENLVKNYQCVFCLSSE
ESEASGPMVHYLDGRPVTSDYEGGSKVTHCHRNCTEWAPNVYFDGDYSINLDAEISRSRR
IKCSFCGLKGAALGCYEKSCRRSFHVPCAKWTSQCRWDTQNFVMLCPLHASSMLPCEGSG
SQKRSKKCTASEGKAHGPKHDTTSQSRAAYLSYKKIVLCCSALSVQEREVVSEFERVSKA
TVLKNWDSSVTHVIASTDENGACRRTLKVLLGILEGKWILNIEWIKACMKEMGPIDEECY
EINVDIHGIRDGPRLGRLRVLNKQPKLFYGYKFYFMGDFIPSYKGYLQNLVVAAGGIILH
RKPVSGDQESTSPDMHTYQTLIIYSLELPDKCKPSKKDTICSQRRHDAEVLASSTGSNVA
SNTWVLNSIAACKLQYLAQ
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgggggatctagagagaatggccatagaactcaaatgccctatctgttggagtttgctc
gattctgctgtgtcgcttacctgcaatcatcttttctgcaactcgtgcattttcaagtcc
atgaaatcagcctctgcttgtcctgtctgtaaaattcctttcactcgtcgagaggttcgc
cctgctcctcacatggacaacttggtcagcatatatataaacatggaagcttcttcagga
gttaatacatttgtaacccagaatgcccctgttactaacttatcagatggagaaaaggaa
tgtgaaggtgatgctgactctggcaagatgaaagctggtggaactcatgaaggtcgtccg
caggagaagaaaacccggaagaaaaagaagtctaagaagacggttcaggccagcatggaa
agttcaggttctgagtttgcaaagccttcttttccagcaaagaaaagggtacatgtgccg
caaaatcttctttcagaaactccaatgaagaatttgaaaattggagactctctcagtgaa
attaacaaagagaaagagggaacggaaaaggtcccagtcaaggaaagtgaaaggcccctc
caaagtgaaaaagataatcctgttctttcgcctttcttttggttgagagaggaaaaagat
ggtgaaatgttaagtcaacaaactgatgaggatcaaattattgatggctcaacaccaaat
cctccttcattcagtgatctcaaggactctgatgatgaagtccattctaatgttgatcta
atggatgaggtgcaaaataaaagctctgttaatttatttgacagtgaaatgtttgaatgg
acacaaaggccttgctctcctgaattgttttcaagtccctctaaaatgcaggtcatggat
acttatgaggatgatgaaaatcaagaggaattggtggcttcctcactagagctggaggca
aatctgccaagagttgatgctgacaacatggaatttgagaatcccaaagaaggaaataga
atggctgatgaagtacctccgagtgtatgttttcctcaaatcagaagttctgatgatcta
aatggaataaagaagtctacaaaaagaaggaaggctagagataaaaataaacaagagcag
attggagaaccaaaaaattcatttgatgaaatgtatgttgaggttactcaggaacaagca
ttggacaattcttctaatctggggaagggtagtagaagaggcaagagggtttgtttcaat
accagtccaattccaacgcctataactgcttgtacagtccccaatacattaggagttcaa
agcattggtgaaatgaagaaggctaagaatatagatattttgccatgtaaacaagaaaat
gagaagcattatgctcaggaaatttctggaaaaagccagatgaaaatatctggaaaacaa
aatatcaatcaaatgaatgagtttgctggttctgattcatccattttcagtctgcgaaca
gataataacgggaaggactctaataggaggcaatgcaaaagcaagtattccagaaaaact
atatattgcagtaaagaattggaaactactaaaaggcaaaaactttcctcggcttgtatc
tctaagactaaaaacaatgaagaaattctacctattgaaagtattcatcaaggtcctgat
gtcagggatttgaatgatacatcaaaagagaaacattgtcccttgatggatcaaacagtg
ttaaggaaatgtgagaatcttgtaaaaaattatcaatgtgttttctgtctctcatcagaa
gaatcagaggcttctggccctatggtgcattaccttgatggcaggcctgtaacatcagat
tatgaagggggatctaaagtcacgcattgtcacaggaactgcacagagtgggcccccaat
gtatattttgatggtgattattcaataaatcttgatgcggaaataagtagaagtcgaaga
attaaatgtagtttttgtggactaaaaggcgccgcacttggttgttatgagaaaagctgt
cgcaggagctttcatgttccttgtgccaagtggacttctcaatgtcgatgggatacgcaa
aactttgtcatgttatgccctctgcatgcttcctccatgttgccctgtgaaggttcagga
tcccaaaaaaggagcaagaaatgcacagctagtgagggaaaagcccatggtcctaaacat
gacacaacaagccaaagtcgggctgcttatttatcatacaaaaaaattgtactatgttgt
tctgctctatccgtgcaggagagggaagttgtttccgaatttgaaagagtatcgaaagct
acagttttgaaaaattgggactcgagtgtcacccatgttatagcatcaacggatgaaaat
ggggcatgcagaaggaccctcaaagtattgttgggtatactggagggaaagtggattctc
aatattgagtggatcaaagcttgcatgaaggaaatgggtcctattgatgaggagtgttat
gaaattaatgttgacatccatggaattcgagatggtcctcgtcttggacgactaagagta
ttgaacaagcaaccaaagcttttttatggctacaagttttattttatgggagattttata
ccttcatacaaggggtatctgcaaaaccttgtggttgctgctggagggataattctgcac
agaaaaccagtgtctggtgaccaagaatcaacttcaccagatatgcatacataccaaacc
cttataatttacagcctcgagcttcctgataaatgtaagccttcgaaaaaggatacaatt
tgcagccaaaggcgtcatgatgcagaggttctggcaagttctacaggttcaaatgtagca
agtaatacatgggttctgaattcaattgcagcctgcaaactgcaataccttgctcaatga
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