KEGG T01710: 100789409

Glycine max (soybean): 100789409

Entry

100789409         CDS       T01710

Name

(RefSeq) probable CCR4-associated factor 1 homolog 7

K12581

CCR4-NOT transcription complex subunit 7/8

Organism

gmx Glycine max (soybean)

Pathway

gmx03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:gmx00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100789409
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100789409
Messenger RNA biogenesis [BR:gmx03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100789409
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     100789409

SSDB

Motif

Pfam:

CAF1

Other DBs

NCBI-GeneID:

100789409

NCBI-ProteinID:

XP_003530297

UniProt:

I1KGU2

LinkDB

Position

7:1857655..1859135

AA seq 277 aa
MPLVLAKSDSIQIREVWNDNLEEEFALIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYD
YHYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGDESGTCCIWQFNFREFNVNEDVFANDS
IELLRQSGIDFKRNNENGIDAHRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCQ
DLPDTQVGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSL
LTSCTFRKLKDNFFSGSLEKYAGVLYGLGVENGQGSH

NT seq 834 nt +upstreamnt +downstreamnt
atgccgctggtattagcgaaaagcgattcgatccagattcgcgaggtatggaacgataac
ctggaagaggagttcgcgttgattcgcgaaattgtggacgattacccttacatcgccatg
gacacggagtttccagggatcgttctccgacctgtggggaatttcaagaacagctacgat
taccattaccaaaccctaaaggacaacgtcgacatgctcaaactcatccaattgggcctc
actttctccgacgagcacggcaaccttcccacgtgcggcgacgaatccggcacgtgctgc
atctggcaattcaactttcgcgaattcaacgttaacgaggacgtcttcgccaacgactcc
atcgagctcttgcggcagagcgggattgatttcaagaggaacaacgaaaacggcatcgac
gcccaccgtttcggggagcttctcatgtcctccgggatcgtcttgaatgacaacgttcat
tgggttactttccacagcggttacgatttcgggtacttgttgaagctcttgacgtgtcag
gatttgcccgatacacaagtgggcttcttcaatttgataaacatgtatttcccaactgtg
tacgacataaaacacctcatgaagttttgcaacagcctccatggaggcttgaacaagctt
gccgagttgttggaggtcgagagggttgggatttgccatcaggccggttccgatagcttg
ctcacttcctgtacattcaggaaattgaaggacaatttctttagtggctccttggagaag
tatgcaggtgtcttgtatgggttaggtgttgagaatggacagggttctcattga

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