Glycine max (soybean): 100789681
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Entry
100789681 CDS
T01710
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gmx
Glycine max (soybean)
Pathway
gmx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100789681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100789681
03036 Chromosome and associated proteins [BR:
gmx03036
]
100789681
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100789681
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100789681
PBAF complex
100789681
GBAF(ncBAF) complex
100789681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
100789681
NCBI-ProteinID:
XP_003553847
UniProt:
I1N798
LinkDB
All DBs
Position
19:25017553..25020858
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AA seq
543 aa
AA seq
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MSVNNNNPSKGIGASSSSFGNAGVPSNSIPSNPGFSQSQGQAQIPVGYQGQFPLSQAHAI
VQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGVSSPLISTPGNASGKRI
PLKPPMRPVGFSPPNSFSPLRPVELTPAARRKKQKLPEKQLQDKVAAILPESALYTQLLE
FESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNAELPTWTLKI
VGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIIMWENARSPAPH
EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHYVKARK
LQNPNDPSYFHCDQPLLKVFGEEKMKFTMVSQKISSHLFPPQPILLEHKIKLSGNNPAGT
ACYDVMVDVPFPIQRELSALLANVEKNKEIETCDEAICGIIRKIHEHRRRRAFFLGFSQS
PVEFINALIESQSKDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAVGSDAP
GST
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacaataataacccttctaagggcattggggcctcttcctcatcctttggt
aatgctggagtaccctccaattctataccttcaaaccctggattttcacagtcccaagga
caggcccagattcctgttggttatcaaggacagtttccactgtcccaggcccatgctatt
gtccaagctcagtccaaggcccaggcccaggcccaggcccaagcagcagctgcagctcat
gctcaactccaggctcatttgcaagctcagggattgagtcttaatcagaaccaggctggt
ggtttgggggtgtcgtcaccgttgatttccacgccgggtaatgcgagtgggaaacggatc
cctctgaaaccccccatgcggccagttgggttttcccctcccaacagcttctccccattg
agaccagtggagctcacgcctgctgctcggaggaagaagcagaagcttcctgagaaacag
ctgcaagataaagtggctgctattctgcccgagtctgcgctgtatactcagcttcttgag
tttgagtctcgcgttgatgctgcgcttgctagaaagaaggctgacatccaggaagcgctc
aaaaacccgccgtgtattcagaaaactcttcgtatttatgtatttaatacttttgctaat
caaattcgcacaattccaaagaagccaaatgcggagcttccaacctggacactgaagata
gttgggaggatattggaggatggtgtagaccctgatcagccaggagtagttcagaagtcg
tctcctttgtatccaaagttttcagcttttttcaaaagagtaactatttccttggatcag
agactgtatcccgataatcatattattatgtgggagaatgctcgatcacctgctccacat
gaaggttttgaagtaaagaggaaaggggataaagaatttacagtgaacatacggctggaa
atgaattatgtgccagagaagtttaagctttcaccagctttgacagaagttcttggtatt
gaggttgatacccgcccgagaattgttgctgcaatctggcactatgtgaaggctaggaaa
ttgcaaaacccaaatgacccttcctactttcactgtgatcagcctcttctgaaagtattt
ggagaagaaaagatgaagtttacaatggtttcacagaaaatatcatcgcatttgttcccc
ccacagcctatacttttggagcataagatcaagctctcgggaaacaatcctgctggtact
gcttgttatgatgtgatggttgatgttccttttcctattcagagggagttgtctgcctta
ttggctaacgtggaaaagaacaaagagattgagacatgtgatgaagcaatatgtggaatc
attagaaaaatccatgagcaccgtaggagacgggcattttttcttggttttagtcaatcg
ccagtagaatttattaatgcattgattgaatctcaaagcaaggatctgaaacttgtatcc
ggagaacctagtcgcaatgcagaaaaagagcgtcgttcagatttcttcaaccaaccatgg
gttgaagatgctgttattcgttacctgaatcgcaaaccagctgtgggaagtgatgctcca
ggaagcacatga
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