Glycine max (soybean): 100789713
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Entry
100789713 CDS
T01710
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmx01009
]
100789713
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100789713
03041 Spliceosome [BR:
gmx03041
]
100789713
Protein phosphatases and associated proteins [BR:
gmx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100789713
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100789713
Spliceosome [BR:
gmx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100789713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
RNA_bind
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
100789713
NCBI-ProteinID:
XP_003524556
UniProt:
I1K1K6
LinkDB
All DBs
Position
5:327034..342164
Genome browser
AA seq
922 aa
AA seq
DB search
MELKVSSPKPESVAPSDRASDPEEKEVSDDDDDDRNHKHRRRETRSQSLERDVSDPVISR
SFKKRNKNFGNRHPFRENESQAFETLKTYSDATTDKEFYFKFDRRRPGLASAPRTPLDMS
QRLRANQSFTGDPGVGRGRGRESGFWNQRESRFGSMDVASQMVPQGSIPPSLYAGRGLPN
VSNAQNAAWNTFGLIPAVPNGGLDMLHPMGLQGTLRAPISSSLNVNIPRQRCRDFEERGF
CLRGDMCPMEHGVNRIVIEDVQSLSQFNLPVSLPSAHLIGAPAGSGSLHSVNASTPSVNN
KCLPGKISKSVVNDDGLPLDGVYTGPGCTSGADLYDPDQPLWNDCGLESSNALLTLQSSK
IDESKPISNDAPDSDCPVGTARTSVSSQGASSSVWARIGSSKNRFDMKEKTNSTTSSFNY
PENQLKEDNDELVGAHNASFQVKQNIADDADPKALEASLKAQTDSMRNIRKSSQKAFCTL
FVNGIPQKYNKREALLAHFKKFGEVIDIYIPLNSERAFVQFSKREEAEAALKAPDAVMGN
RFIKLWWANRDSIRKDSTTSGNGVIVTPRGQAPAFVPSHPVVTDRGKDIHQADASKTMYE
VSSPTDQSKPVITDGPKVPPPLQKKLVNLESLKEELRKKQEMLDQKRNEFKRQLNKFEKQ
ASGLKGEVSTEQATKRLKMGGTSDVAKLASPQSSDADVGMTSPHTEATADKNKQLVYPVS
QSPKSSTATRLQESTGLKHPIQPLMPVNRYKLDNRPAAFRIIPPLPAGLANVAVLKEHFS
PYGELSAVELEDVQVNDSSQQEAHITFTTRWAAERAFINGKCWNDHNLKFTWLTPTSSSS
SNATGSREPSLSAPKEPLDSDDHSEEKLDNSVNQESIVSDAEHKNSETNNGLELVEREPS
EDPQSTTRQVSSPKQSPEGNFC
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaagtttcatctccaaaacctgagtctgttgcaccgtctgatcgtgccagt
gatcctgaggaaaaggaagtgagtgatgatgatgatgatgatcggaatcacaagcatcga
aggagggaaactcgttctcaatctttggagagagatgtttcagatcctgttatcagtagg
tcattcaaaaagcgtaacaaaaattttgggaataggcatccattcagggaaaatgaatct
caagcctttgaaacgctgaaaacttacagtgatgccaccacagataaagaattttatttc
aagtttgatagaaggcgccctggcttggcttcagcccctcgaacacctttagatatgagt
caaagactacgggcaaaccaatcttttactggagatcctggtgttggcaggggaagaggc
agggaatctggtttttggaatcaacgtgaatctaggtttggttcaatggatgttgcttca
caaatggttccgcaggggtccattcctccaagcctttatgccggacgtgggttacccaat
gtttcaaatgcgcaaaatgcagcatggaatacattcggtttaattccagcagtgcccaat
ggtggcctagatatgcttcatccgatgggtttacaaggaacactcagagcacctattagt
tcatctttgaatgtgaatattcctcgccaacgatgtagggattttgaggaacgtgggttt
tgccttagaggggacatgtgtcctatggaacacggtgttaatcggattgtcattgaagat
gttcagagtctttcacagttcaaccttcctgtttcacttccaagtgcacacctaattgga
gctcctgccggatctggatctttacattcagtaaatgcttcgaccccttcggtgaacaac
aaatgtttacctggaaaaatttccaagtctgtggtcaatgatgatggtttgccgttggat
ggtgtatatactggtcctggttgcacaagtggagctgatctttatgatcctgatcaaccg
ctttggaatgattgtggtctagagtcttcaaatgcactcctgactcttcagtcatccaag
attgatgaatccaagcccatatctaatgatgctcccgatagtgattgtccagttggaact
gccagaacttctgtcagttcacagggtgccagttcatctgtctgggccagaattggtagt
tcaaaaaacagatttgacatgaaagaaaaaactaactctacaacgagttcctttaattat
cctgagaatcaattaaaggaagataatgatgaattagttggtgctcacaatgcttccttt
caagtaaagcaaaacatagcagatgatgctgacccaaaagccttggaagcctctttgaaa
gcacaaactgatagtatgcgtaacatacgcaaatcatcacaaaaggcattctgtactcta
tttgtaaatgggatacctcagaaatataacaagagagaggctcttcttgctcattttaag
aagtttggggaagttattgacatctatattccattaaacagtgaacgggcttttgtgcaa
ttctccaagagagaagaggctgaagctgctttgaaggcaccggatgcggtaatgggtaat
cgttttatcaagctatggtgggctaatcgtgatagcattcgcaaagatagtactacaagt
gggaatggtgtgattgtaactccccgtgggcaagcacctgcttttgttccatctcatcct
gttgtcactgataggggtaaagacatccatcaagctgatgcttcaaagactatgtatgaa
gtatcatcgcctactgatcaatctaagcctgtcatcacagatggacccaaggttccacct
cctttgcagaagaagcttgtaaacttagagagtctaaaggaagaactgcgcaagaagcag
gaaatgctagatcaaaaacgcaatgagttcaagcgccagttgaacaaatttgagaaacaa
gcttctggactcaagggtgaagtatctactgagcaagctaccaagaggctcaaaatgggc
gggacatctgatgttgccaaactggcttctcctcaatcatcggatgctgatgttggcatg
acatctccacacacagaggcaacagctgataagaataaacagctggtctatcctgtatcc
caaagtcctaaatcaagtacagcaacaagactgcaagaatctacaggcttgaagcaccca
attcaaccattaatgcctgtaaatagatacaaattggacaatcgtcctgctgcatttcgt
atcatcccacctttgccagctggtctagcaaatgttgctgttttgaaggagcacttctca
ccatacggtgaactttctgccgtagagctagaagacgtgcaagttaatgatagtagccaa
caagaagctcatataactttcactactcgttgggcagctgagagggcatttattaatggt
aaatgctggaatgaccacaatctaaagttcacgtggctgacacctactagttctagttct
agtaatgctactggtagcagagaaccttctctatctgctcccaaggagcccttagattca
gatgaccattctgaagaaaaattagacaactctgtgaaccaagaatcaattgtatcagat
gctgagcataaaaattcagaaactaataatggtttggagcttgtggaaagggaaccaagt
gaagatccccagtctaccacaaggcaagtttcttctcccaaacaatcacctgagggcaat
ttctgttga
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