Glycine max (soybean): 100790200
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Entry
100790200 CDS
T01710
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100790200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100790200
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100790200
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
100790200
NCBI-ProteinID:
XP_040861857
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Position
10:complement(46628398..46632163)
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AA seq
200 aa
AA seq
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MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQISECVAIWW
RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFKMITN
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgtcgcaggttgtgaatacttacccgttgtccagctacacgttcggcacgaag
gagcccaagatggagaaggatacctccgtcgcggatcgtctcgctcgcatgaaagtcaac
tatatgaaggagggaatgaggaccagtgtggaaggaattttactggtacaagagcacaat
catcctcatatacttcttctccaaattggaaacacattctgcaaactcccaggcggtcgt
ctcaaaccaggagagaatgaaattgagggcttgaagaggaagttgactagcaagcttggt
gctaattcaccagctcttgtgcctgactggcagataagtgagtgtgtagcaatctggtgg
aggccaaattttgaaaccataatgtatccatactgccctcctcatataacaaaacccaag
gagtgcaaaaagcttttccttgttcatttatctgagagggaatactttgcagtgcccaaa
aatttaaaacttcttgctgttccattgtttgaactctatgataatgttcagagatacggg
ccagttatatccactattcctcagcagctatccagattccagtttaaaatgatcactaat
tga
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