Glycine max (soybean): 100790464
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Entry
100790464 CDS
T01710
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100790464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100790464
03009 Ribosome biogenesis [BR:
gmx03009
]
100790464
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100790464
Spliceosome [BR:
gmx03041
]
Complex A
U1 snRNP components
U1 related factors
100790464
Complex B
100790464
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
Pre-60S particles
Helicases
100790464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
100790464
NCBI-ProteinID:
XP_003529884
UniProt:
I1KGC5
LinkDB
All DBs
Position
7:805182..811334
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AA seq
507 aa
AA seq
DB search
MSRYDSRSGDPTSYRDRRSDSGLGAPTGFGGSVQHSSSNRRDYDDGGSPKRNLSLDGLPH
FEKNFYVESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKSFHDAGFPEYVMEEITKAG
FTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPSIVHVNAQPILNPGDGPIVLVL
APTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE
SNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKF
LYNPYKVIIGSSDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCD
QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVIN
YDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTAANARFAKELIAILEEAGQKVSPELAAMG
RGAPPPPSGPRGFQDRGRGYGSSRPWS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgctccggcgacccaacttcctatcgtgaccggaggagcgat
tctgggctaggtgcacctacagggtttggtggttctgtacaacactcttcatcaaacagg
agggattatgatgatggtgggtcaccaaagaggaacctcagtttggatggtttacctcat
tttgagaaaaacttctacgttgagtcaccagctgtaagggcaatgacagatgctgaagtt
aatgagtaccggcagcagagggaaataactgttgaaggtcgagatatcccgaaacctgtc
aagtcctttcatgatgctggttttccagaatatgtaatggaagaaattacaaaagctggc
tttactgaacctacgcccattcaatctcaaggttggcccatggctttgaaggggcgtgat
ctgataggaattgcagaaacaggatcagggaagacacttgcttacttgttgccatccatt
gtgcatgttaatgctcagcctattctaaatcctggagatggaccaattgtgttagttttg
gctccaactcgtgaacttgctgtccaaatacaacaagaggctactaaatttggtgcatca
tctaggattaagagtacatgcatctatggtggggttccaaagggacctcaggtgcgtgat
ctccagaaaggtgtcgaaattgtaattgccactccaggaaggttaattgatatgcttgag
tcaaatcataccaacttgcagagggtcacataccttgtattggatgaagctgataggatg
ttggatatggggtttgatcctcagctacggaagattgtctcccagattcgtccagatcgt
caaactttgtattggagtgctacctggccaaaggaggtcgaacaattggcaaggaagttc
ctttataacccatacaaagtaattataggctcttctgatttaaaagctaaccatgcaata
cggcaatatgttgacattgtttcggaaaagcagaaatatgataaattggtaaagttgcta
gaggacatcatggatggcagccgaatactgatatttatggataccaaaaaaggatgtgat
caaatcactaggcaactccgcatggatggatggcctgcactctcaattcatggagataaa
agtcaagcagaaagagattgggtgctctcagaatttaaatcaggcaaaagtcctattatg
acggcaacagatgttgcagcccgtggtctagatgtgaaggatgtgaaatatgtaataaat
tatgacttcccggggtcacttgaggattatgttcatcgcattgggcggacagggagagct
ggtgcaaaaggaactgcatacacatacttcacagctgctaatgccagatttgcaaaggaa
cttatagccatactcgaggaagctggacagaaagtgagtcctgaattagcagcaatgggg
cgtggtgcacctcctccaccttcaggtccccgaggtttccaagaccgtgggaggggttat
ggcagttctcgtccatggagctga
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