Glycine max (soybean): 100790967
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Entry
100790967 CDS
T01710
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100790967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100790967
03036 Chromosome and associated proteins [BR:
gmx03036
]
100790967
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100790967
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100790967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
CHGN
GLOD4_N
Motif
Other DBs
NCBI-GeneID:
100790967
NCBI-ProteinID:
XP_003544079
UniProt:
I1M679
LinkDB
All DBs
Position
14:complement(468326..474440)
Genome browser
AA seq
1022 aa
AA seq
DB search
MECDVGGVSDSCILHTCKRRRVYKGCFHPSIDIMTETEASLPILNSSGYYTKPSLKELVA
RELVEPGYCSRVPDFTVGRFGYGYVRYLNETDVRGLRIDEIVKFHRHEIVVYSDENDKPA
VGQGLNKAAEVVLVLDSEILKSKEGKEDVMVSKLKQITKRQKAQFISFDLVTGEWKFLVG
HFSRFGFGDDDEEDIAMDDAEVYDVEKESPSNTNELELSHSLPSHLRLDPVKMREMRLLM
FPDEEEVEDLSCKSSSGKQYVRPLQSSAQAINHRSTPPVARKTPFPLLEYKHGNFDSNSP
GGILMVQQHKGMPLRTIKSQGFKLDLKHETPVSGNYAHNIVDAGLFMGKSFRVGWGPNGI
LVHSGAPVGSSGNHKLLSSVVNLEKVAFDNVVRDENKKVTEELIDHALVSPLNFHKGINH
VMKEVEIGPCKLTLQKLEANRSTLSEISHHYCDLIERQLSVPGLSSTTRLGLTHQVMTWE
LIRVLFSDREQKGQVESLGADNEEDMMQDIKEICQDVDREALPLMRRAEFSYWLRESVSY
HVQNQISSLNDSDYLQHIFVLLTGRQLDEAVQLAVSKGDVRLACLLSQAGGSTVNRSDIA
RQLDIWRNKGLDFSFIEKDRLRLYELLAGNIHDALHDVKIDWRRFLGLLMWYKLPPNTSL
PIAFQTYKHFVDEGTAPYPVPLFIDEGTSEEVISWNTDNHFDISFYLMLLHANEETKFSF
LKAMFSAFSSTPDPLDYHMIWHQRAVLEAVGVINSNDLHILDMSFVSQLLCVGKCHWALY
VVLHLPLREDYPYLHVNLIREILFQYCETWSSDESQQQFIEDLGIPTDWMHEALAIYYNY
NGDHSKALDQFLQCANWQKAHAIFITSVAHRLFLQAKHAEIWRIATSMEDHKSEIENWEL
GAGIYISFYLMRNSLQDDTNAMTELDSLESKNAACQDFVSQLNESLAVWGCRLPVDARVV
YSRMAGEICDLLLSGVGEGATRDEQFNCFDTAFSAPIPEDQRSGHLQDAVYLFTSYLSEI
AT
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgacgttggaggtgtctctgattcatgcattttgcacacttgcaagagaaga
agggtttataaaggctgctttcatccatccattgatatcatgacagaaactgaagcttcc
ctacctatcttgaactcgtccggttattataccaaaccatctttgaaggaattagtggcc
agggaactcgttgaacctggttattgcagccgtgtccctgatttcactgttggaagattt
ggttatggatatgtcaggtatctcaatgaaactgatgtcagggggttacgtatagatgaa
attgtgaagtttcataggcatgagatagttgtatacagtgatgaaaatgataagcctgct
gttggccagggccttaacaaggcagctgaagtagttttggtattagacagtgaaatattg
aagtctaaggaggggaaggaagatgttatggttagcaaattaaaacaaattacaaagaga
cagaaggcacaatttatttcctttgatctagtgactggtgagtggaaattcttagttgga
cacttcagcagatttgggtttggtgatgatgatgaggaagacattgctatggatgatgct
gaggtatatgatgttgagaaagaatcaccatcaaataccaatgaacttgaactttctcat
tctcttccttctcatcttaggcttgatcctgttaaaatgagagaaatgagattattgatg
tttcctgatgaagaagaggtagaggacttaagttgcaaatcatcttctggtaagcagtat
gtgcggcctttacaaagttctgctcaggcaatcaaccatcgatccaccccaccagttgct
agaaaaactccatttccattacttgagtataaacatgggaattttgattcaaattctcct
ggaggaattttgatggttcagcagcataagggcatgcctcttaggacgataaaatcacaa
ggttttaagctagatctcaaacatgaaactccagtatctggaaactatgctcacaatata
gttgatgctggtctgtttatgggtaagtcatttcgagttgggtggggaccaaatggcatt
cttgtacactccggtgcacccgtaggaagcagtggtaatcacaaactgttatcatctgtt
gtcaatttggagaaagttgctttcgacaatgtggtcagggatgaaaataaaaaagtgact
gaggaacttattgatcatgctttggtatctccattaaattttcacaaaggaataaaccat
gtgatgaaagaagttgaaattggtccctgcaagttgacacttcaaaagcttgaagctaat
cgttcaaccctgtctgagatttctcatcactattgtgatcttattgagcggcaattgagt
gttcctgggttatcttccactactcgtttgggtttgacacaccaagtaatgacctgggag
ttaattagagttcttttttctgacagagaacaaaaaggtcaagtagaatctttgggtgct
gacaatgaggaagatatgatgcaggatataaaggaaatttgtcaagatgttgaccgagaa
gcactccctctaatgaggagggcagagtttagttattggttgcgagagagtgtttcctat
catgttcaaaatcaaataagctctctaaatgattctgattatctgcagcatatatttgta
ctcctgactgggcggcaactagatgaagcagtgcagctggctgtgtccaaaggagatgtg
aggttggcttgtttgttaagtcaggctggtggttctactgtgaatcgctctgatattgca
aggcaacttgatatttggagaaataaaggcctggattttagtttcattgaaaaggacaga
ttgagactctatgaattgcttgcaggaaatattcatgatgcattgcatgacgtcaaaatt
gactggaggaggttcttaggtttattaatgtggtacaaattaccaccaaacacttcatta
cccattgcttttcagacttataaacattttgttgatgagggaacagctccatatcctgtt
cccctttttattgatgaaggaacatcagaggaggttatcagttggaacacggataaccac
tttgacatttcattttatttaatgcttcttcatgccaacgaagagacaaaattcagcttt
ctgaaggctatgtttagtgcattctcttctacccctgatccacttgattatcatatgatt
tggcatcaacgagcagtcttggaagctgtgggtgttatcaattctaatgatcttcatatt
ctagacatgtcatttgtgtctcagctgttgtgtgtagggaaatgtcattgggccctatat
gtggtccttcacttgccccttcgtgaagattatccatatcttcatgtaaatctgattcgg
gaaatattgttccaatactgtgaaacttggagttcagatgaatctcagcaacagttcatt
gaggatttaggcattcccacagattggatgcatgaggctttggcaatttattataattat
aatggggatcactcaaaagcccttgaccaatttcttcagtgtgcaaattggcagaaagct
catgctatttttataacttcagttgctcataggttattcttgcaagcaaaacatgctgag
atatggaggatagcaacttccatggaggaccataaatctgaaattgaaaactgggagttg
ggagctggaatttatatttcattttatttgatgaggaactcacttcaggatgataccaat
gctatgaccgaattggattctcttgaaagtaaaaatgctgcttgtcaggattttgtcagt
cagctaaatgaatccctagctgtttggggttgcagattacctgttgatgcaagggtggtg
tattcaagaatggcaggcgagatatgtgatttgctactatcaggtgtaggtgagggtgct
acccgtgatgagcagtttaactgctttgacactgctttcagtgctcccattccagaagac
caacgctctggtcacttgcaggatgcagtgtatctttttaccagctatctctcagagatt
gctacgtaa
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