Glycine max (soybean): 100791079
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Entry
100791079 CDS
T01710
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
gmx03015
mRNA surveillance pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100791079
09122 Translation
03013 Nucleocytoplasmic transport
100791079
03015 mRNA surveillance pathway
100791079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100791079
03041 Spliceosome [BR:
gmx03041
]
100791079
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100791079
Spliceosome [BR:
gmx03041
]
Common components
Common spliceosomal components
Cap binding complex
100791079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
100791079
NCBI-ProteinID:
XP_003553301
UniProt:
I1N7Z9
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All DBs
Position
19:complement(35375873..35394521)
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AA seq
863 aa
AA seq
DB search
MSSWRSLLLRIGDKSPEYGVSSDYKDHIDTCFGALRRELDLSQSEIMEFLLMCAEQLPHK
IPLYGTLIGLINLENEDFVKQLVVKTQSKFQDALDSGNCNGVRILMRLLTVMMSSKVLQP
SSLVAVFETFLSSAATTVDDEKGNPLWQSCADFYITCILSCLPWGGAELIEQVPEDIERV
MVGVEAYLSIRKHTFDIGLSFFENDDENGKGLGDKDFLEDLWDRIQVLSSHGWKVDSVPR
SHLSFEAQLVAGKSHEFGPICCPRLPSPPSVPSGVSIGKQKHEAELKYPQRIHRLNIFPP
GKIEDLQPIDRFVMEEYLLDVLLFLNGCRKECASFMVGLPVSFRYEYLMAETIFSQLLML
PQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLDLPRWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPK
GGPNFSFGAEDGKESNEHVLSGQLNNMVKGKAPVREIISWIDESVFPSNGLEVTLRVVVQ
TFLNIGSKSFTHLMTVLERYGQVFAKVCPDQDKQVMLIAEVSAFWKSNTQMTAIAIDRMM
GYRLVSNLAIVRWVFSAENIEQFHTSDRPWEILRNAVSKTHNRISDLRKEILSLKKNFSS
AEETAKEAKAELDAAESKLTLVDGEPVLGDNPTRLNRLKLHAEKTKNEVVSLQKSSEAKE
ALLAQAMEENEALFLLLYKSFSNVLIERLPEGARTLHELKSAQVDVVMAVDPEEPSSMEL
DNESQRPQNSQTNGEKKGGAYNVGEKEQWCIITLGYVKAFSRQYAAEIWPHVEKLDAEVL
TEDAPLLFRSSVYSGLRRPIHDA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggagaagccttcttctacgaatcggcgacaagagccctgaatatggagtc
tcctccgactacaaagatcacattgatacgtgctttggcgcccttcgccgcgagctcgac
ctctctcaatccgagattatggagttccttctcatgtgtgctgagcaattgcctcacaag
attcctctgtatggtaccctgattggcttaattaacttggaaaatgaggactttgtgaaa
caactagtggtgaaaactcaaagtaaatttcaggatgccttggattctggaaactgcaac
ggggttcgtattctaatgcggcttttgactgttatgatgagcagtaaggttcttcaacca
agctctttggtggctgtgtttgaaacatttttatcatcagctgccacaacagtagatgat
gagaaagggaatcccttatggcagtcatgtgctgacttttacataacttgcattttatca
tgcctcccatggggtggagcagaacttattgagcaagttcctgaagatattgagagagtg
atggttggtgtagaagcttacttgagcatcagaaagcatacatttgacatcggattatcc
tttttcgagaatgatgatgaaaacgggaaaggtcttggtgacaaggattttttggaagat
ttatgggatagaatacaggttttatcaagccatggatggaaggttgacagtgttccaaga
tctcatctttcatttgaagctcagctggttgctgggaagtctcatgaatttgggccaata
tgctgcccccgcttaccaagcccgccttcagtcccttctggcgtgtctattggtaaacag
aagcatgaagcagaattaaaataccctcaaaggatacaccggctaaacatatttcctcct
ggtaaaattgaggatctacagcctatagacagatttgttatggaagagtatctcctagat
gtgcttctgttcttaaatggctgtcgaaaggaatgtgcttctttcatggttggtctgcca
gtttccttcagatatgagtacctcatggctgaaacaatattctctcagctgctgatgcta
ccacaaccacctttcaaaccagtatattacacactggttattattgacctttgtaaggct
cttcctggagcttttcctgcagttgtagctggagcagttcgtactctctttgagaggatt
gctgatttggatatggagtgtcggacacgtctgatcctttggttctcacaccatttatca
aacttccagttcatctggccttgggaagagtgggcttatgtcctagacctcccaaggtgg
gcccctcaacgcgtctttgttcaggaggttttggagagggaagttcgcttgtcatactgg
gacaaagttaagcagagtattgaaaatgcacctggtttagaagaattgcttcctccaaag
ggtgggccgaactttagttttggtgcagaagatggtaaagaaagcaatgagcatgtactg
tctggacagctcaacaacatggttaaaggaaaggcacctgtccgtgaaataatctcatgg
attgatgaaagtgtgtttccaagtaatggtctagaagttactctcagagtggttgtacaa
acttttctcaatattggatccaagagtttcactcatttgatgactgtcttagagagatat
gggcaagtctttgcaaaagtatgtcccgaccaggataagcaagtcatgctgatagctgaa
gtgagtgctttctggaagagtaacacccaaatgacagcaatagctattgacaggatgatg
ggttatcgacttgtttcaaatctggctattgtgagatgggtcttctcagcagaaaatatt
gagcaatttcatacgtcagatcgtccatgggagattcttagaaatgcagtaagcaagaca
cacaatcgtatttctgatctaaggaaagaaatattatctcttaaaaagaatttttcatct
gctgaagaaactgcaaaggaggcaaaagcagagttagatgctgcagagtcaaaacttaca
ctagtggatggcgaaccagttcttggtgacaatcctactagattgaatagattgaaatta
catgctgaaaagacaaagaacgaggtggtgtctcttcaaaaatcttcagaagccaaggaa
gctcttcttgcccaagcaatggaggaaaatgaggcattgtttctcttgttgtacaaaagc
ttctcaaacgtgttgatagagcgccttcctgaaggagctagaacactgcatgagttgaag
tctgcacaagttgatgtggtgatggcagtggaccctgaagagccatcatcaatggaatta
gacaatgagagtcagagacctcaaaacagtcaaacaaatggcgagaagaaaggtggtgct
tataatgtaggtgaaaaggagcagtggtgtatcatcactttgggttatgtgaaggccttt
tctaggcagtatgccgctgagatatggccccatgttgaaaagttggatgcagaggtattg
acagaagatgcacctcttctttttcggtcatctgtttattctggtcttcgaagaccaatt
catgacgcttga
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