Glycine max (soybean): 100791233
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Entry
100791233 CDS
T01710
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100791233
03009 Ribosome biogenesis [BR:
gmx03009
]
100791233
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100791233
Spliceosome [BR:
gmx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100791233
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
Pre-60S particles
Helicases
100791233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ARTD15_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
100791233
NCBI-ProteinID:
XP_006575166
LinkDB
All DBs
Position
8:complement(42666727..42675747)
Genome browser
AA seq
789 aa
AA seq
DB search
MKSLKLQQQQQRLLYYQKKKNPSKNLRQKEPTMSPSFVFDPPSDEEIEHSEHEEEEEEES
VGEPESGSESESEGEGGEVEEGHKEARVPKKKKKKTQSPWDFAKYTESVAEEHARRSTTS
VDEKISKALKQRSTPLVAELDHSSESEPDEQEDYRPEEEDEEEGNDGDIKSFFAPSGGTS
FHADSFLQLNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFAL
PTLERLLFRPKRMRAIRVLILTPTRELAVQVHSMIEKLAQFTDIRCCLVVGGLSTKVQEA
ALRTMPDIVVATPGRMIDHLRNAMSVDLDDLAVLILDEADRLLELGFSAEIQELVRLCPK
KRQTMLFSATMTEEVDELIKLSLSKPLRLSADPSTKRPATLTEEVVRIRRMREVNQEAVL
LAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQV
DFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSL
LKAIAKRAGSKLKSRIVAEQSIHKWSHIIEQMEDQISEVLHEEREERVLRKAEMEATKAE
NMIAHREEIFSRPKRTWFVTEKEKKLAAKASKASMDKCKSSGKEVISAEQAEDLRMKEKR
KREREKHLPRKKRRKLEAAREMLEEEEDDKQVETKGGNKKEKGGMSLVDLAYRRAKAVKA
VKKALDSGKIVEKNKKKSNNNSRKTPSRTEEMRELFQTDMKDKKSKRRGVGGGKKSKSSF
KSKSRYKRK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgttgaaattgcagcagcagcagcaacgactactatactaccagaaaaagaag
aacccttctaaaaacctgcggcaaaaagaaccaacaatgtcgccgagcttcgtcttcgac
cctcctagcgacgaagaaatcgaacactccgaacacgaagaagaagaagaagaagaatca
gtaggagaaccagagtcaggatcagaatcagagtcagaaggagaaggaggagaagtagaa
gaagggcataaagaagcgcgggttccgaagaagaagaagaagaaaacacagtctccatgg
gacttcgccaaatacacggaatcagtggccgaggaacacgctcgcaggagcacaacctcg
gtcgacgagaaaatctcaaaagcactcaaacaacgttccacgcctctcgttgctgagctc
gaccacagctccgagtccgaacctgatgaacaagaagattatagaccggaggaagaagat
gaagaagagggtaatgatggtgacatcaaatccttttttgctccttctggtggaacctct
ttccatgccgattccttcttgcagctcaatttgtctcgccctttgctccgggcttgtgag
gccttggggtattctaaaccaacaccaattcaggcagcttgtattccattggcattgagt
ggtcgtgatatatgtggtagtgccattaccgggtcagggaagacagctgcatttgcacta
cctactttagagaggttgttgttccgtccaaagcgcatgcgtgcaataagggtcctcatt
cttactccgaccagagagttggcagtccaagttcacagtatgatagagaagcttgctcag
tttactgatataaggtgttgcctggttgttgggggtctgtcaacaaaggtgcaagaggct
gctttgagaacaatgccagacattgttgtggctactccaggacgcatgatagaccattta
cgcaatgctatgtccgtggatttggatgatcttgctgttctaatccttgatgaggcagat
cgtctattggagcttggatttagtgctgaaattcaagaacttgttcgcttgtgtcccaaa
aaaaggcagactatgttgttttcagcaacaatgactgaggaggttgatgaacttattaaa
ctttccctgtcaaagcccttgcgtctttctgctgatccatctacaaaacggccagcaacc
ttgactgaggaggttgttagaatacgaagaatgcgtgaagtaaatcaggaagcagttctt
cttgcaatgtgctccaaaacttttacttccaaagtcatcatcttcagtggaacaaagcaa
gctgcacatagattgaagattatatttggattagctggcttaaaagctgctgagcttcat
ggaaatcttactcaagcccagcgccttgaagctttggaacagttcaggaagcagcaagtg
gattttttggttgcaacagatgtggctgcccgtggccttgacattattggtgttcaaaca
gttatcaactttgcatgtccacgtgatcttaccagctatgttcatcgagtgggtcgtact
gcaagagccggaagagaaggatatgctgtcacttttgtgactgacaatgaccgatcactt
ttaaaagccattgcaaagagggcaggttcaaagctgaaaagccgtattgttgctgagcaa
tctatacataagtggtctcatataattgagcaaatggaagaccaaatttctgaagtactt
catgaagagagagaagaaagagttctaagaaaagctgaaatggaggccacaaaggccgaa
aacatgattgcacatagggaagagatcttttcccgccccaaaagaacctggtttgtcaca
gagaaggagaaaaagcttgctgcaaaagcatccaaggcatccatggataagtgcaagagt
tctgggaaagaggttattagtgctgaacaagctgaagacctcagaatgaaggagaagagg
aagcgagagcgagagaaacatttgcctagaaagaagcgtagaaagttggaagcagctaga
gagatgttggaggaggaggaggatgacaaacaagtagagactaaggggggaaataaaaaa
gaaaagggtggaatgtcacttgttgatcttgcttaccgacgggcaaaagcagtgaaggct
gtcaagaaggccttagattctggcaagattgtggagaagaataaaaagaaatctaataat
aattcccgaaaaactccttcaaggacagaagagatgcgggagttattccagactgacatg
aaggataaaaagtcaaaaagaagaggtgtgggaggaggaaagaagtcaaagagttcattc
aaaagcaagtcaaggtacaagcgcaagtag
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