Glycine max (soybean): 100791603
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Entry
100791603 CDS
T01710
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gmx
Glycine max (soybean)
Pathway
gmx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100791603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100791603
03009 Ribosome biogenesis [BR:
gmx03009
]
100791603
04131 Membrane trafficking [BR:
gmx04131
]
100791603
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100791603
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100791603
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100791603
Membrane trafficking [BR:
gmx04131
]
SNARE
SNARE associated proteins
Others
100791603
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100791603
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100791603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
Mg_chelatase
nSTAND3
AAA_28
ATPase_2
Parvo_NS1
AAA_18
IstB_IS21
Vps4_C
ABC_tran
AAA_7
Viral_helicase1
AAA_lid_PRS2_C
NB-ARC
AAA_24
TsaE
NACHT
DUF815
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
100791603
NCBI-ProteinID:
XP_003521403
UniProt:
I1JPP3
LinkDB
All DBs
Position
3:complement(40645010..40649816)
Genome browser
AA seq
808 aa
AA seq
DB search
MASQPESSDAKGTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPSEYCV
VAPDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGSSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRKRDN
PEAMEEDDVEDEIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFA
DSTSAGGTAAASDPFSSAGGADEDDLYN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcaacctgaatcatctgacgcaaagggcacaaaaagggattttagcaccgcc
atattagagcgtaagaaggctccgaatcggctcgtggttgatgaagctgtcaacgacgac
aactctgttgtcgcgcttcatcctgataccatggagaaacttcaactttttcgtggtgac
accatcttgatcaaggggaaaaaaagaaaggatacaatatgtatcgcacttgctgatgag
acatgcgaggaaccaaaaataagaatgaacaaggttgtaagaaacaaccttagggttagg
cttggagatgttgtttcagtgcatcagtgtcctgatgtcaaatatggaaagcgagtccac
attcttcctgtggatgatactattgaaggagtaacaggaaacctctttgatgcctactta
aaaccttatttcctagaggcatatcgaccagtgaggaagggtgacctcttccttgtgaga
ggggggatgagaagtgttgaattcaaggttattgaaactgacccttctgagtactgtgtt
gtcgctccagacacagagatcttctgtgaaggagagcctgttaaaagggaagatgagaat
agattagacgaggttggatatgatgatgttggtggtgtaagaaagcaaatggcacagatt
cgggaattagtggaactgccactgaggcacccacagttattcaagtctattggtgttaag
ccaccaaaaggaattctgttgtatggacccccagggtctggtaagactttaattgctcgg
gcagttgcaaatgaaactggtgccttctttttctgcatcaatggacctgagatcatgtca
aagctggctggtgaaagtgaaagcaatctgaggaaggcatttgaggaagcagagaaaaat
gcgccatccatcatcttcatcgatgagatagattcgatagctccaaagagggagaagact
catggtgaagtggagcggaggattgtttcccagctcttgaccctcatggatggtcttaaa
tcacgtgctcatgtaattgttattggagctactaatcgccccaacagcattgaccctgct
cttaggaggtttggaagatttgaccgggagatagatattggagttcctgatgaagttggg
cgtcttgaggttcttcggattcatacaaagaacatgaaacttgctgaagatgttgatttg
gaaaaaatagccaaggatactcatggttatgttggtgctgatctagctgctttgtgtact
gaagctgcacttcaatgcatcagagagaaaatggatgtgattgacttggaagatgagaca
attgatgctgaaatattgaactccatggcagtgacaaatgagcatttccagactgctctt
ggatcaagcaatccttctgctctacgtgaaacggttgttgaagtgcccaatgtcagctgg
gaagatattggtggtcttgaaaatgttaagagggaactccaagagactgttcaatatcca
gtggaacaccctgaaaaatttgagaagtttggaatgtcaccttcgaagggagtcctcttt
tatggacctcctggttgtggtaaaacgcttttggcaaaagctattgccaatgaatgtcaa
gcaaacttcattagtgtcaaaggtcctgagctactaacaatgtggtttggagaaagtgag
gctaatgtgagggaaatttttgacaaggctcgtggttctgctccatgtgtcctattcttt
gatgaacttgactctattgcaactcagaggggtagtagtgtcggagatgctggtggtgct
gctgacagggttttgaaccaactgcttacagaaatggacggaatgtcggcaaagaaaact
gtgttcatcattggggccactaatcgaccagatattattgacccagctcttctgcgtcct
ggtcgtctcgaccagttgatttatatccccctcccagatgaggattcccgtcatcagata
tttaaagcctgcttgaggaaatcccccgtgtcgaaagatgttgatcttagagcacttgca
aagtacactcagggtttcagtggtgctgatatcacggagatttgccagcgtgcgtgcaag
tatgccattagagagaacattgagaaggacattgagagagaaaggaggaaaagagataac
cctgaagcaatggaagaggatgatgttgaagatgaaatagcagaaatcaaggctgctcat
tttgaggaatcaatgaaatatgctcgaaggagtgttagcgatgctgacattcgcaagtac
caggcattcgcccaaacattacagcagtctagaggatttggaagtgagttcaggtttgca
gattccacctccgccggtggtacagctgctgcatctgacccattttcctctgctggtgga
gctgacgaggatgatctttacaattag
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