Glycine max (soybean): 100791608
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Entry
100791608 CDS
T01710
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100791608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100791608
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100791608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
CTD
Nucleoporin_FG
DUF6200
Motif
Other DBs
NCBI-GeneID:
100791608
NCBI-ProteinID:
XP_014619761
UniProt:
I1LN96
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All DBs
Position
11:complement(39022483..39026119)
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AA seq
349 aa
AA seq
DB search
MFGSAQPSSSPFGTPAFGTPSSTPAFGSSLFSTPFSSQQPQPQQQQQQQTPLFQQQQQQQ
TSSAFGFQNSLAFAAPQSSPFPNAQLTTQMANVAPVPFSLADRDVQTIVDAYKDDPGNPK
YAFKHLLFSVTEPQFRVKPAGVSDIMWAEAIGKLQGMESPDRERLWPQLVQGFKDLSQRL
KIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIQRLKQKEQILQQHLLRVMRIVEAL
EEKGCRIPLTKGEAELAEKLATITRKLKGSGAELSRRVQNLLIVSRVKANSNGFGSSVYL
PGSTKIHEQSLGDLQEVLQQQLEAIARLGNVLKRDIRDMEIMMTEDTKN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctccgctcaaccttcttcttctcccttcggcacccctgcattcggtacccct
tcttctacccctgccttcggttcttccctcttttccacacccttctcttctcaacaacca
caaccacaacaacagcagcaacaacaaacacctctgtttcaacagcaacaacaacaacaa
acttcttctgctttcggctttcagaattcactcgcattcgcagcaccgcaatcctcgccc
ttcccaaatgctcaattaaccactcagatggctaacgttgcacctgttcctttctccctc
gccgatcgcgatgttcagactattgttgatgcatataaggatgatcctgggaaccccaag
tacgcctttaagcatttgttgttcagtgtaacagaaccgcagtttagagtgaagcctgct
ggtgtatcagatatcatgtgggcagaggcaatagggaagcttcagggtatggaaagtcct
gatagagaacgcctgtggccacagcttgttcagggttttaaggatctttcacaacgcctt
aagatacaagatgaagtcatcgtttctgatgcggagagattgcgtataacccaaagcaat
gttaaaatgctccaaagacattttcaagctgatactcttccttggattcaaagactgaaa
caaaaagaacaaattctccagcaacatcttttaagagtaatgagaatagtggaggcattg
gaggaaaaaggctgtcgtatacccttaacaaaaggggaagctgaacttgctgagaaatta
gccacaataactagaaagctgaaaggatctggagcggaactgtctagaagagtacaaaat
ctactaattgtatctcgtgttaaagctaatagcaatggatttggtagctccgtttatctt
ccagggtcaaccaaaattcatgaacagagtcttggtgatctacaagaggttttacagcag
cagctggaggccattgcaagactaggcaatgttctgaagcgagatatacgggatatggag
attatgatgaccgaggacacgaagaactga
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