Glycine max (soybean): 100791889
Help
Entry
100791889 CDS
T01710
Name
(RefSeq) flowering time control protein FY isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100791889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100791889
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100791889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
eIF2A
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_Vps41
WD40_RFWD3
WD40_like
WD_LRWD1
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
PROPPIN
Motif
Other DBs
NCBI-GeneID:
100791889
NCBI-ProteinID:
XP_003546720
UniProt:
A0A0R0GCH5
LinkDB
All DBs
Position
15:complement(45307097..45328792)
Genome browser
AA seq
714 aa
AA seq
DB search
MMYNDQQHQHQQHQYQQQQQQQQQPFHQPPGPEFHRGPPPPSHPPPMMRQGSASSTNLAP
EFHHPGPGGPPPPHYDAHSDSHGAKRIRKLTQRKAVDYTSTVVRYMQIRMSQRDSRDRTV
LQPTPAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTG
EFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSA
HKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLSGHGWDVKSVDWHPTKSLLV
SGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKE
LESFRGHRKDVTTLAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEISNAHDNNVWDLAW
HPIGYLLCSGSSDHTTKFWCRNRPGDPARDRFNTGMPGYADQNPVVGRMGGNFTIAEGPT
TPGPFAPGLTRNEGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAPPLPPGPHPSLLN
ANQQQPYQQNPQQIPQHQHQALPQQMGPLPMPPNMQQLQHPSHSPFPNMPRPPPQMPIGM
PGSIPGISSVPTSHPMPMPGPMGMQGAMNQMGTPMPQGPYVGMNQMHSGSLPTSGGPPLG
GFPGNLPNMQGPSNANYPQGASFNRPQGGQMPLMQGYSPYQSGNQSGMPPNAQP
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacaatgatcagcagcatcagcaccagcagcaccagtaccagcaacaacagcag
cagcagcagcagcctttccaccagccgccgggtccggagttccaccgcggaccgccgccg
ccgtcgcatccgccgccgatgatgcggcaaggctccgcctcgtcgacgaacctcgccccc
gagtttcaccatcccggccccggagggcccccgcctcctcattacgatgctcacagtgat
agccatggtgcaaaaagaatacgaaagcttactcaaaggaaagctgttgattatacaagc
acagttgtgcgttatatgcagattcgtatgtcgcagcgggattcaagggataggacagta
ctgcaacccaccccggcagcagcaattgatatgttgccagcagttggctatccagacaat
ccatccacaagctttgctgctaaatttgttcatacatctctaaataaaaatcgttgcccc
attaatcgcgttctttggactccaacaggccggcgacttattactggttcacagactggg
gaatttactctttggaatggacaatcttttaattttgaaatgattcttcaggcgcatgat
caagcaatcagatccatggtctggagtcacaatgacaattggatggtctctggtgatgat
ggaggcgcaataaagtattggcagaacaacatgaacaatgttaaagccaacaaatctgct
cataaagaatcagtccgtgatttaagtttctgtaggacagatttgaagttctgttcatgc
tctgatgataccacagttaaagtttgggattttgcacgctgtcaagaagagtgttcatta
tctggccatggttgggatgtgaagagtgttgactggcatcctacaaaatctctattagta
tcaggtgggaaggacaatctagtgaaactttgggatgctaaaacagggagagagctttgt
tcatttcatggccacaaaaacactgtgctgtgtgtaaaatggaatcaaaatggcaactgg
gtgttaacggcttcaaaggatcaaataataaagctttatgacataagagcaatgaaggaa
cttgaatcgttccgtgggcatcgcaaggatgttactactttggcatggcatccgttccat
gaagagtactttgtcagtgggagttatgatggttccatcttccattggcttgttgggcat
gaaactccacaaattgaaatttccaatgctcatgataataatgtgtgggatcttgcatgg
catcctattggataccttctgtgcagtggcagcagtgatcatacaacaaagttttggtgc
agaaataggccaggagaccctgcccgtgatagatttaacactggcatgccaggatatgct
gaccaaaatcctgttgttggtcggatgggtggtaattttacaatagctgaaggcccaaca
actccaggaccatttgcccctgggttgactcgaaatgagggtaccattccaggtgttgga
gttgcaatgcccttgtctattccttctcttgacatgcctcaaggggagcagaagcaaccc
catcctgtttcaatgggtgctcctcctcttccccccggtccacatccctcccttcttaat
gccaaccaacagcaaccataccaacagaatcctcagcagatcccacaacatcaacaccag
gctctaccacaacagatgggtcctttgcctatgcctccaaatatgcaacaactacagcac
ccttcccattctcccttccctaatatgcctcgccctccaccccaaatgcctattggcatg
ccaggatctataccagggatttcatcagtgcctacatcacatccaatgccaatgccaggt
ccaatgggaatgcaaggggcgatgaatcagatgggtactccaatgccacaaggtccttat
gtaggcatgaatcaaatgcattcagggtccttgcctacaagtggagggccacctcttggt
ggttttccaggcaacttgccaaatatgcaagggccatcaaatgccaattatcctcaaggt
gcttcatttaacagacctcaaggtggccaaatgcctctgatgcaagggtatagtccttac
cagtctggtaatcaatctgggatgcctccaaacgcacaaccatag
DBGET
integrated database retrieval system
