Glycine max (soybean): 100792021
Help
Entry
100792021 CDS
T01710
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100792021
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
100792021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
Cnd1
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
100792021
NCBI-ProteinID:
XP_006593690
UniProt:
K7LXL8
LinkDB
All DBs
Position
13:14555096..14575174
Genome browser
AA seq
1804 aa
AA seq
DB search
MSFPATSGASAAALSSSGHRGIGLSNTVHSELAACLPLPSLPVFCGASDQDLRLVDSPAR
LNRVDVLAQSAKIAELLRHTDVSYLNLRGEAKGVPYIYVEPLELHDEVIRCNPEAFEYST
AGPVKEQIYGSAVSEKRKPESSFPIQRETQKDYNATHSRQLDNFSTNDISSLSSKKSKIK
KKGGDGISVAPDSAELQGAYIERFREFLEDLCNKSEFNSDDRDEAEWLPLPLTDLRLLVN
EITSIREKKLLHLVPVEVLVRLLKVLDHQIHRAEGLSIEECDNSDSELVSSVLIALESIH
AALAVMAHTDMPKQLYKEEIIERILEFSRHQIMDVMCACDPSYRALHRPSENTAFEVDDY
EDNDAEFGSASKKRRTSKTSKLKKSVSSRVSTAVNTILQKLCTILGLLKDLLLIERLSDS
CILQLVKTSITTFLVDNIQLLQLKAISLLSAIFYLYTQHRTYVMDEVVQLLWKLPYSKRA
LRSYHIREEEQRQIQMVTALLIQLIHCSANLPDALRKASNGNAVLEASVDASYPIKCHEA
ATEACCLFWSRVLQRFASVKTHDASELKSIIENLVTDLLTTLNLPEYPASAPILEVLCVL
LLQNAGPKSKDVSARSLAIDILGTIAARLKRDALVCSQEKFWILQDLLNQDAAAQHHPKD
TCCVCLGGRVENLFICHGCQRLFHADCLGIKEHEVSSRNWSCQTCICHKKLLVLQSCCNS
QQKNDVKKNCNTDSEVSKQEIVQQLLLNYLQDVTSADDLHLFICWFYLCLWYKDDSNCQQ
KSSYYLARMKSKIIVRDSGTVSSILTRDSIKKITSALGQNSSFCRGFDKILHTLLASLME
NSPVIRAKALKAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHP
GVGFKYFEKIAERIKDTGVSVRKRAIKIIRDMCTSNANFSGFTRACTEIISRVSDDEASI
QDLVCKTFSEFWFEEPPASQTQVFGDGSTVPLEIVKKTEQIVEMLRGMPNNQLLVSVIKR
NLSLDFLPQSAKAVGVNPVSLAIVRKRCELMCKCLLEKMLQVDEMNNDGVEVGALPYVLV
LHAFCLVDPTLCAPASNPSQFVVTLQPYLKSQVDNRMVAQLLESILFIIDAVLPMLGKLP
PSIVGELEQDLKQMIVRHSFLTVVHACIKCLCSVSKMSGKGAAVVEQLIQFFFKCLDTQA
VDNKQKVGRSLFCLGLLIRYGNQLLASSSSKLIDVGRSVRLFMKYLSVEDFVVKVRSLQA
LGFVLIAKPEYMLENDVGKILEETLSSASDTRIKIQGLQNMFEYLLEAESQMGTDKNDEN
VAGYSVGAGHSVPVAAGAGDTNICGGIVQLYWDNILGRCLDFSEQVRQSALKIVEVVLRQ
GLVHPITCVPYLIALETDPLESNSKLAHHLLMNMNDKYPAFFESRLGDGLQMSFMFMQSI
CGSSENVDHKIQSKIPTSGKGKPEAGSLAQAKLGVSRIYKLIRGNRVSRNKFLSSIVRKF
DNPRWNKLVIAFLIYCTEVLALLPFISPDEPLYLIYAINRVVQVRAGPLEANFKAWSSSI
SRHNSPYGNGMYQQGPDEPTVTSQVMSLDLNGTFQQNVDVQPNSNDMRTLDLNGSNHQLP
DYPLSYMGSSEAKLHSAGYTDPFSFSNDDLEKVQADCLSAIALQLLLKLKRHLKIMYSLD
DARCQAYSPTEQPKPGEVISRQNIAFNIGDSQFSLPTSPQELIQRYQEFKHALREDTVDY
SHYTANIKRKRPTATPRRVQVRKPVYVAGGYDDGDDDGDYTGGSEMHKISFSGRRSSLRN
SRQY
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccctgccacctctggcgcctcggccgccgcgctgtcgtcctccggccaccgc
ggaatcggcctctccaacaccgtccactccgagctcgccgcgtgcctcccgctgccgtcc
ctcccggtcttctgcggcgcctccgatcaggacctccgcctcgtggactcgccggcgcgc
ctcaaccgcgtcgacgtgctcgctcagtccgccaagatcgccgagctgctccgccacacc
gatgtgtcgtacttgaatttaagaggtgaagccaaaggtgttccgtatatatatgttgag
cctttagaactccatgacgaagttatcaggtgcaatcctgaagcatttgaatacagcact
gcaggtcctgtcaaggagcagatctatggtagtgcagtatctgaaaaaaggaaaccggaa
tcaagttttcctatccaaagagagactcaaaaagactataatgcaacacatagtcgccag
cttgataatttttccacaaatgatatctcttcgttgtcttctaaaaaatcaaaaataaaa
aagaaaggtggtgatggaatatctgtagcacctgattctgctgagcttcaaggtgcctac
attgaaaggtttcgtgagtttttggaggacttgtgcaacaaatctgaatttaatagtgac
gatcgagatgaagcagaatggttgccattgcctcttacagatcttagattacttgtcaat
gaaataacatctattcgtgaaaagaaacttctgcatttggttcctgtagaagtcctagtt
agactattaaaagttctagatcatcagatacatagagcagaaggcctgtcaattgaggaa
tgtgataattcagattcagaattagtttcatctgttttaattgcattggagtccattcat
gctgcactagcagtgatggctcatactgatatgccaaagcaactctataaagaagagatc
attgagcgaattctggagttttccaggcatcaaataatggatgttatgtgtgcatgtgat
ccatcataccgtgcgctacatagacctagtgaaaacactgcatttgaagttgatgattat
gaagataatgatgctgaatttggttcagccagcaagaaacggcgtactagcaagacttcg
aagttgaagaaatcagtatcaagcagggtctctactgctgtaaatactattcttcagaag
ctgtgcactattcttgggttactcaaagatttgttgttaatagagaggttatcagatagt
tgcatactacaacttgtaaaaacaagcattacgacatttttggttgataatatccagctt
ttgcaattgaaggcaatcagtttactcagtgcgatattctatttatacacacaacatcgc
acttatgtgatggatgaagtggttcaacttctgtggaaattaccatattcaaaacgagct
ttaaggtcttatcacatacgcgaggaagagcaaaggcagatccaaatggttactgctttg
ctgattcagttgattcattgtagtgctaacctccctgatgctttaagaaaagcttcaaat
ggtaatgctgtattagaagcctctgttgatgctagttatccaattaaatgccacgaggca
gcgacagaagcctgctgtctgttttggagccgggtacttcagcggtttgcaagtgtgaag
actcatgatgcttcggagctgaaatccataatagagaatcttgttacagatttactgaca
actttaaatttacctgaatatcctgcttcagctcctattctagaggtactctgcgtccta
ctacttcagaatgctgggccaaagtctaaggatgtctctgcacgttccctggcaattgat
attcttggtacaattgctgcaaggttgaagcgcgatgctttggtttgtagccaggaaaaa
ttctggatacttcaggatttacttaatcaggatgctgctgctcagcatcatccaaaagat
acatgttgtgtctgtttggggggaagggtagaaaatttgttcatatgtcatggttgccag
aggctttttcatgctgattgcctgggcattaaagaacatgaagtttccagtcgaaactgg
tcctgccagacatgcatctgtcataagaaactacttgtattacaatcatgttgcaattcc
cagcaaaagaatgatgtgaaaaagaattgcaatacagattctgaagtttctaagcaagag
attgttcaacagttgcttctgaattaccttcaagacgttacctctgctgatgatctgcat
cttttcatctgctggttttatctctgcttgtggtacaaagatgattcaaattgtcagcag
aagtccagttactaccttgctagaatgaaatcaaaaatcatagtacgagattctggtact
gtgtcttctatattgactagggattcaatcaagaagattacttcagctttaggccaaaac
agttcattttgccgaggatttgataaaattcttcacacgcttctggcaagcttgatggag
aactctccagttattagggctaaggctttaaaagcagttagtattattgtagaggctgat
ccagaggtattgggtgataagcgagtacaatcagctgttgaaggaaggttttgtgattct
gcgatatctgttagagaagcagcattggaacttgttggtaggcatattgcttcgcatcca
ggtgtgggttttaagtattttgagaagattgcagagagaatcaaagatactggagtaagt
gttcggaaacgagctatcaaaatcattcgagatatgtgcacttcaaatgccaacttctct
ggatttacaagagcttgcacagagataatttcacgtgttagtgatgatgaagcaagcatc
caggaccttgtttgcaaaacatttagtgagttttggtttgaggagcctcctgcatcacaa
actcaggtctttggggatggtagtactgttccacttgagatagttaagaaaacagagcaa
attgttgaaatgttgagaggaatgcccaataatcaacttcttgtaagtgtaataaagcgc
aatttgtcacttgattttttaccacaatctgcaaaagctgttggggtaaatccagtgtcc
cttgcaatagtgcgtaagcgttgtgaattgatgtgcaaatgcttgctggagaagatgttg
caggttgacgaaatgaacaatgatggagtggaagtgggtgcacttccatatgtgttagtc
ttgcatgcattttgtcttgtggacccaactctctgtgcaccagcttcaaacccttcccaa
tttgttgttacattgcagccatatctgaagagtcaggttgacaatcgcatggttgcacag
ctacttgagagtatactattcataattgatgctgtgcttcccatgcttgggaagttgcct
ccgagtattgttggggaactcgagcaagatttgaaacagatgattgtccggcattctttc
ttgacagttgtccatgcctgtatcaaatgcctctgctctgtgagtaagatgtctggaaaa
ggggctgctgtagttgaacaacttattcagttcttcttcaaatgtttggatactcaggca
gttgataacaaacagaaagttggacgatctctcttctgtcttgggttgcttatccgttat
ggcaatcaattgttagcaagctccagtagtaaactcattgatgttggacgcagtgtcaga
ttgtttatgaagtatctctctgtggaggattttgttgtcaaggttagatcactgcaggca
ctaggatttgttctaattgctaagcctgaatatatgttggaaaatgatgttggaaaaata
ctggaggaaacattatcctctgcgtctgatactcgcattaagattcaaggattgcaaaac
atgttcgagtatcttctagaagctgaaagccaaatgggaaccgataaaaatgatgaaaat
gttgctggttattcagttggagctgggcatagtgtacctgttgctgctggtgctggggat
acaaacatatgtgggggtatagttcagttgtattgggataatattttgggcagatgtttg
gatttcagtgaacaagttcgtcaatcagccctgaagattgttgaagttgtgctgcgccaa
ggtcttgttcatccaatcacctgtgttccataccttatagcccttgaaacagatcctctg
gagtcgaattcaaagttggctcatcatcttctgatgaatatgaatgacaagtaccctgca
ttttttgaaagccgcttgggtgatggacttcaaatgtcatttatgtttatgcaatctatt
tgtggaagttctgaaaatgttgatcataagattcaatctaagatccctacttctggaaaa
gggaagcctgaggctgggtcacttgctcaagctaaacttggggtttctcgaatttacaag
ctcatccgagggaatcgggtatcaaggaacaaatttttgtcctcaatcgtgcggaaattt
gataatccaagatggaataaattagtaatagctttcttaatatactgcacagaagtccta
gcattgctgccattcatttcacctgatgagcccctttatttaatctatgctatcaatcga
gtagttcaagtaagggccggaccactagaagcaaactttaaagcctggagttcaagcatt
tcacgtcataactcaccttatgggaatggaatgtatcaacaggggccagatgagcctact
gttacaagccaagtaatgtcattggatttgaatggaacatttcagcaaaatgtagatgtt
cagccaaattccaatgacatgagaaccctggatttaaatggatcaaatcatcaactgcca
gattatcctttatcgtatatgggtagctcagaagcaaagctgcattctgcaggttacaca
gatcctttttccttctcaaatgatgatctggagaaagttcaggccgattgtttatcagca
attgcattgcagcttcttttgaagctcaagagacacctgaaaatcatgtatagtcttgat
gatgcccgttgtcaggcttattctcctaccgaacaaccgaaacctggagaggttatctcc
agacagaatattgcttttaatatcggtgattcacagttcagtttgcctacaagtccgcaa
gaattgatacaaagatatcaggaatttaaacatgctttgagggaagacactgtggactat
tcacattacactgcaaatataaaacgaaagcgacctacagccacaccaagaagagttcaa
gttcggaaacctgtatacgtggcaggtgggtacgatgatggggatgatgatggggattat
actggtggaagtgagatgcacaagataagttttagtggccgcaggagtagccttagaaac
tcaaggcaatattga
DBGET
integrated database retrieval system
