Glycine max (soybean): 100792308
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Entry
100792308 CDS
T01710
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100792308
Spliceosome [BR:
gmx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100792308
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
100792308
NCBI-ProteinID:
XP_003552536
UniProt:
I1N4F1
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All DBs
Position
18:complement(54962058..54968113)
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AA seq
496 aa
AA seq
DB search
MSTSSQHQFRYTQTPSKVLHLRNLPWECSEEELRELCRPFGKIVNTKCNVGANRNQAFVE
FVDLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLL
PAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEP
DSNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQGPATAWQNPQAA
PMYPGSAPAYHTQVPGGQVPAWDPNLQAVRPSYVSAPGTFHVQSGAAPPMPAYAPAAAMP
AASSPHAQSSPMAHNANPMGIAQPRVPPNANLQSSGASLSAPGSSPLMQTSQAAQGLVQP
NARPGGASPPGQHYYG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctcgagccagcaccagttccgatatacacaaaccccttccaaggtcctgcac
cttcgcaacctcccctgggaatgctccgaggaggagctcagagagctctgcagacccttc
ggtaagatcgtcaacaccaagtgcaatgtcggcgccaatcgcaaccaggcttttgtcgaa
ttcgtggatctaaatcaagccatttcgatggtttcatattatgcttcatcttcagaacca
gctatggttcgtggtaaaactgtttacattcagtattctaatagacatgaaattgtcaac
aacaaaagccctggagatattcctggaaatgtcttgctggtaactattgaaggtgtggaa
gctggggatgtgagcattgatgttatccatttggtgttttctgcttttggctttgttcac
aaaattgctacattcgaaaagactgcaggtttccaggctctgattcagttcactgatgct
gagaccgcttcttcagctagggatgcactggatggaagaagtataccaagatacctgctt
ccagcccatgttggttcttgtaacttgcgaatttcatattccgcacataaagatctgaat
atcaaatttcagtcaaatcgcagcagggactacacaaatcccatgcttcctgttaattat
actgctattgagggggcagtacagactgctgtaggccctgatgggaagaggaaagaacct
gacagcaatgtgcttttggcttccattgaaaatatgcagtatgctgttactgttgatgtc
ctccacacggtgttctctgcatttggtactgtccagaaaattgctatatttgaaaagaac
ggtcaaactcaggcactgattcagtaccctgatatcataacggcatcagctgctagagaa
gctctagaggggcattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggctttcagtgacaaaagtagagactatacagtgcca
gatcctagtctgctagcagcacaaggtcctgcaacagcttggcaaaatcctcaggctgca
cctatgtaccctggcagtgcccctgcttatcatactcaagttcctggcggacaagtgcca
gcatgggatccaaacctgcaggcagttagaccgagttatgtatcagcacctggtactttt
catgttcaatctggtgcagctcctccaatgccagcctatgcgccagccgcagctatgcct
gctgcttcctcacctcatgcacaaagcagccccatggctcataatgcaaatccaatggga
atcgcccagcccagggttccacccaatgcaaatttacagtccagtggtgcttcactttca
gctcctggttcctcacctctcatgcaaaccagccaagctgctcaaggattggttcagcca
aatgcaagacctggtggtgcttcacctccaggtcaacattattatggttag
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