Glycine max (soybean): 100792529
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Entry
100792529 CDS
T01710
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100792529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100792529
Spliceosome [BR:
gmx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100792529
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100792529
NCBI-ProteinID:
XP_003541464
UniProt:
I1LZK9
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Position
13:26377696..26384763
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AA seq
563 aa
AA seq
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MASKREREASDRVEDEGVDNESKRQRLDEDSSPSPPPVSIANPLSGLANNYADIDEEEDY
VRRERGSINERRNDGSQHNGHKKYGEADDSDEEDDSHEQFSGRNRQVEVRKDCPYLDTVN
RQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKV
YCLPDGYEINDPSLDDIRNVLNPRFAAKEVEQLDKNKQWSRALDGSSYLPGMVGLNNIKE
TDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHTRNFKGQVSPHEF
LQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNTSIIYECFQGELEVVKEIP
NKVISDKKENNAEKLSDGVNERYAFVKETSKMPFLMLGLDLPPPPLFKDVMEKNIIPQVP
LFNILKKFDGETVTEVVRPHIARMQYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV
KNLELKDYIPLPTPKENEKLRTKYDLIANVVHDGKPGEGFYRVFVQRKSEELWYEMQDLH
VSETLPHLVALSETYMQIYEQQQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaaaagggaaagggaagcgagtgatagagtagaggatgaaggggttgataat
gagtcgaaaaggcagaggctggatgaggattcttccccctctcctcctcctgtgtccatt
gcaaatcctctttctgggttggccaataattatgctgacattgatgaggaggaagattat
gttagaagggaaaggggttctataaatgagaggaggaatgatgggtcccagcataatggg
cataagaaatatggagaggctgatgatagtgatgaagaagatgattcacatgaacaattt
agtggaagaaatcgccaggttgaggttcggaaggactgtccttatctcgatactgttaat
agacaggttttggattttgactttgaaaaattctgttctgtctccctctcgaatttaaat
gtgtatgcatgtttggtttgtgggaagtattaccaagggagaggaaagaagtctcatgca
tatacacatagtctggaagcaggacatcacgtctatatcaatctccgcactgaaaaagtc
tactgtcttcctgatggttatgaaattaatgatccttcattagatgacattcgaaatgtc
ttaaatccaagattcgctgcaaaagaagttgaacaacttgacaaaaataagcagtggtct
agggctcttgatggttctagttaccttcctggaatggtgggacttaataatatcaaggag
actgattttgtgaatgtaacaattcaatccttaatgagagttacccccttgaggaatttt
tttcttatccctgaaaattatcaacactgcaaatctccacttgttcatcgatttggtgaa
ctcactaggaaaatctggcatacacggaactttaaaggacaggtcagcccacacgagttt
ctacaagcagtgatgaaagccagtaaaaaaaggtttcggataggtgcacaatctgatcca
gtagagttcatgtcatggctacttaatacgctacatgcagatcttaagacttcaaagaag
aatacaagcataatatatgagtgttttcagggtgaacttgaggttgtgaaagagattcct
aacaaagtgatctctgataagaaagaaaacaatgctgagaaactttcagatggggtgaat
gagcgatatgcatttgtcaaagaaacttcaaaaatgccatttctaatgttagggttggac
ttgccaccacctcctcttttcaaggatgtgatggaaaaaaatataataccacaggttcca
ctttttaacatactaaagaagtttgatggtgaaactgtcacggaggtggtccgtcctcat
atagcaaggatgcagtatcgtgttaccagattgcccaagtatatgattcttcatatgcgc
cggtttactaaaaataatttttttgttgaaaagaatcctacgttagtcaactttcctgtg
aagaacctggagttgaaggattacattcccttgccaacaccaaaagaaaatgagaaattg
cgaactaaatatgatttgattgctaatgttgttcatgatggcaaacctggtgaaggattc
tatagggtatttgtgcaacgcaaatcagaagaactatggtacgagatgcaggatttgcac
gtctctgaaacacttcctcatttggttgcactttcagaaacttatatgcagatttatgaa
cagcagcagtaa
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