Glycine max (soybean): 100792823
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Entry
100792823 CDS
T01710
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100792823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100792823
03012 Translation factors [BR:
gmx03012
]
100792823
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100792823
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100792823
Translation factors [BR:
gmx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100792823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
nSTAND3
T2SSE
NACHT
Rad17
ATPase
Motif
Other DBs
NCBI-GeneID:
100792823
NCBI-ProteinID:
XP_003535817
UniProt:
I1L9L1
LinkDB
All DBs
Position
10:complement(9749928..9759639)
Genome browser
AA seq
1030 aa
AA seq
DB search
MPRCLFRPTFYTAHHRLTLTFLHPPASKLFPTDLRISSPVMAYRPNYQGGGRRGASSSAG
RGGGRRGGGGGRGGGGGRGEQRWWDPVWRAERLRQQQAEKEVLDENEWWDKIEKMKRGGE
QEMVIKRNFSIADQKTLADMAYQHELYFHAYSKGKVLVISKVPLPDYRADLDERHGSTQK
EIKMSTDIERRVGNLLNSSQSTGAAPSSLPSVSADLGHKQSAATIKSVSSRQADSSKEKL
SVALKEGQELVQASDSLKEMKSFREKLPAFKMKSEFLKAVQENQVLVVSGETGCGKTTQL
PQFILEEEISCLRGADCNIICTQPRRVSAISVAARISAERGESLGEAVGYQIRLESKRSA
ETRLLFCTTGVLLRQLVQDPDLIGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLI
LMSATINADMFSKYFANAPTMHIPGFTYPVAEHFLEDVLEKTRYSIKSDFDNFEGNSRRR
KQQDSKKDPLTEMFEDIDVDTNYKNYSLGVRKSLEAWSGSQIDLGLVEATIEYICRNEAG
GAILVFLTGWDEISKLLDKLKGNNLVGDSSKFLILPLHGSMPTVNQCEIFDRPPPNKRKI
VLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ
PGVCYRLYPKLIHDAMPQYQLAEILRTPLQELCLHIKSLQLGTVGSFLEKALQPPDPLAV
KNAIELLKTIGALDEQEELTPLGRHLCNIPLDPNIGKMLLMGSIFQCLNPALTIAAALAY
RNPFVLPINRKEEADAAKQSFAGDSCSDHLALLKAFEGWKEAKRSGNEKQFGWDNFLSLA
TLRLIDDMRMQFLNLLSDIGFVDKSRGATAYNQYSHDLEMVCAILCAGLYPNVVQCKRRG
KRTAFYTKEVGKVDIHPASVNAGVHLFPLPYMVYSEKVKTTSIYIRDSTNISDYALLLFG
GNLVPSKSGEGIDMLGGYLHFSASKSVIELIRKLRGELDKLLNRKIEEPGFDVSSEGKGV
VAAAVELLHS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctgcctcttccgccctactttctacaccgcccaccatcgcctcactctcacc
ttcctacacccgcccgcatccaaacttttccccacagaccttcgaatctcctcccccgtc
atggcctaccgccccaactaccagggaggcggccgcaggggtgcctcctcctccgccggt
cgcggcggaggacgccgtggaggcggcggaggacgcggcggcggcggaggacgcggcgag
cagaggtggtgggaccctgtctggcgcgccgagcgcctgaggcaacaacaagcggagaag
gaggtgttggatgagaatgagtggtgggataagatagagaagatgaagagaggaggggag
caggagatggtgattaagcgtaactttagtattgcagaccagaaaaccctagctgatatg
gcctatcagcatgagctctacttccatgcttatagtaaggggaaggttctcgtcattagc
aaggttccattgcctgattatcgtgcagatcttgatgagcgtcatggatcaacacagaag
gagattaaaatgtccacagacattgagagaagagtaggaaatcttttgaatagctcacaa
tcaacgggggcagcaccatctagtttgccttctgtatcagctgaccttggacataaacaa
tctgcagccactataaaatctgtttcttcacgacaggctgattcttctaaggagaaactt
agtgttgcactcaaggaagggcaagaacttgtacaggcaagtgatagtttgaaggaaatg
aaatcatttagggagaagcttcctgcatttaaaatgaagtctgagtttctgaaagctgtt
caagaaaatcaggtattagtagtttcaggagagacgggctgtggtaaaacaacacagttg
ccacaattcattctagaagaagaaatatcgtgtttgcgcggagctgattgcaacataatt
tgtactcagcctcgtcgagtatctgcaatttctgttgcagctcgaatatctgctgaaaga
ggtgagagtctcggagaagcagttggataccaaatccgtcttgaatcaaaacgttctgca
gaaacacgccttcttttctgcaccactggtgtattacttcggcagttggtacaagaccca
gacttgataggtgttagtcatttgctggtggacgaaattcatgaaagaggcatgaatgaa
gactttttaattataattttacgtgaccttcttccaaggcgtccagatttgcgtctcatt
ctgatgagtgccaccattaatgctgatatgttctctaaatactttgccaatgccccaaca
atgcacataccgggatttacttaccctgtggcagagcacttcctagaagatgtgttggag
aaaactcgatacagcatcaagtcagattttgacaattttgaggggaattcaaggagaagg
aaacaacaggattcaaagaaggatcctttgactgaaatgtttgaggatattgatgtagat
actaattacaaaaattacagcttgggtgttagaaaatctcttgaagcttggtcaggctcg
cagattgatttgggtttggtagaggcaacaattgagtatatatgtcggaatgaagctggt
ggagcaattcttgtatttctcactggctgggatgaaatttctaagctgcttgacaaacta
aaaggaaataacttagttggagactctagcaagtttttaatccttcctttacatggctca
atgcctactgtcaaccaatgtgaaatatttgaccgtcctccccctaacaagagaaaaatt
gtgctagcaacaaatattgctgagagtagcatcaccatagatgacgttgtgtatgtcata
gactgtggcaaagcaaaggagaccagctatgatgctctaaataagcttgcttgcttgttg
ccatcgtggatttcaaaggcttcagctcatcagagacgtggtcgtgctggtcgagtgcaa
cctggagtttgctataggttgtatccaaaactgatccatgatgcaatgcctcaatatcag
ttagctgaaatcctccgaacacctttgcaagagttgtgccttcatattaaaagtttgcag
cttgggactgtaggatcatttttagaaaaggcacttcagccaccagatcctttagctgtt
aagaatgctattgaacttctcaaaacaattggggcgttagatgaacaggaggagctcact
ccactgggtcggcatctttgtaacatacctttggacccaaatatagggaagatgcttctc
atgggctctatatttcagtgcctaaatcctgccttaactattgctgctgctcttgcatac
cgcaacccatttgtcttacccataaacagaaaagaggaagccgatgcagcaaaacaatct
tttgcaggtgattcttgcagtgatcacttagcccttctcaaagcttttgaaggatggaag
gaggcaaagcgaagtgggaacgaaaaacaatttggttgggataatttcctatcccttgca
accttgcggttgattgacgatatgagaatgcagtttctcaatttattatctgacatcgga
tttgttgacaagtccaggggtgctactgcttacaaccagtatagtcatgatttggagatg
gtttgtgcaattctttgtgctgggctctaccctaacgttgtgcagtgcaaaagaagagga
aaacggacagcattctacactaaagaagtagggaaggttgacatccatccggcttctgtt
aatgctggggttcatctcttccctcttccctacatggtgtatagtgaaaaggtgaaaaca
accagcatctatattagagactctaccaacatttcagattatgccctacttctgtttggt
ggtaatcttgtccctagcaaaagtggtgagggcattgacatgcttggaggttaccttcat
ttctctgcttcaaaaagtgtcattgagttaataaggaaattgcgtggggagcttgacaag
cttctgaacagaaaaattgaagaaccaggatttgatgtttcgtctgaaggaaagggagtg
gttgctgctgctgttgaattgctgcacagttaa
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