Glycine max (soybean): 100793057
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Entry
100793057 CDS
T01710
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
gmx
Glycine max (soybean)
Pathway
gmx03020
RNA polymerase
gmx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100793057
09124 Replication and repair
03420 Nucleotide excision repair
100793057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100793057
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100793057
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100793057
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
100793057
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100793057
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100793057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
100793057
NCBI-ProteinID:
XP_003524800
UniProt:
P46279
C6SWZ3
LinkDB
All DBs
Position
5:32362023..32366522
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AA seq
176 aa
AA seq
DB search
MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATV
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccacatagtgctggagcgaaatatgcagctgcatccacgctactttggtcgc
aaccttcgtgataatctcgtttccaagctaatgaaagatgtggaaggcacttgcagcggc
cgacatggatttgtggtggcagttacagggatagaaaacatagggaaagggctaattcgt
gatggaacagggtttgtgacatttccggttaagtaccaatgtgttgtcttcagaccattt
aagggagagatcctggaagctgttgttactatggtgaacaagatgggattttttgctgaa
gctggacctgtccaaatctttgtttcaaaccatttgattccggatgatatggagttccag
tctggagacatgccaaattacactacatcagatggatcagttaagattcaaaaagatagt
gaagtgagactaaagataattgggactcgagtggatgctactgaaattttctgcataggt
accataaaagatgatttcttgggtgtgatcaacgaccctgcaacagtttaa
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