Glycine max (soybean): 100793149
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Entry
100793149 CDS
T01710
Name
(RefSeq) rRNA biogenesis protein RRP5 isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmx03009
]
100793149
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
90S particles
Other 90S particles
100793149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
NRDE-2
UTP6_C
Motif
Other DBs
NCBI-GeneID:
100793149
NCBI-ProteinID:
XP_006575179
UniProt:
I1JFV5
LinkDB
All DBs
Position
2:complement(27911446..27951842)
Genome browser
AA seq
1914 aa
AA seq
DB search
MAPHSKKPQKKKKKNDSVDKPKIDKASKKIFKPKKREQNDAVVAAKSEALSLQLEDEVPD
FPRGGEFSAKGRSDYDEFSAEDPSRKTRKKKKGRSASSKSNEGADDWGSLSGDGITGKLP
RRVNRITLKNITPGMKLWGVVAEVNEKDLVVSLPGGLRGLVHASDAVDPIFDDKIEVGEI
FLSGVFCVGQLVSCVVLRLDDDKKEKGSRKIWLSLRLSLLHKNYNLDVVQEGMVLAAYVK
SIEDHGYILHFGLPSFLGFLPKNSSAEGWGGEVKIGKLLQGLVRTIDKVRKVVYLSSDPD
TMSKSVTKDLRGLSIDLLVPGMLVNARVKSILENGVMLSFLTYFTGTVDLFHLQNIYPGT
NWKDKCSESQKVVSRILFIDPSSRAVGLTLNPHLVQNRAPPSHVKIGDIYDNSKVVRVDR
GLGLLLEVPSIPEPTPAFVSISDIAEEEVQKLEKKYKEGNRVRVRILGLRYLEGIATGVL
KASALEEEVFTHSDVKPGMVVKAKILSVDSFGAIVQIPGGVKALCPLRHMSELEISKPGK
KFKVGAELVFRVLGCKSKRVTVTHKKTLVKSKLGIISSYADATDGLITHGWITKIEVHGC
FVRFYNGVQGFAPRSELGLEPGADPGTVYNVGQVVKCRVISCIPASRRINLSFIIKPTRV
SEDDMVTLGSLVSGVVDRITSNAVVVYVNASGFSRGTISMEHLADHHGQAILMHSRLKPG
YNFDQLLVLDVKGNNLILSAKSSLIKHAQQIPADINQIHPNSVVHGYICNLIESGCFVRF
LGHLTGFAPRNKAADDQKSNILEAYYIGQSVRSNISNVSSETGRVTLSLKQTACSSTDAS
FIQDYFLMDDKIAKLQYWGSGASDSKWDEGFNIGMVAKGKVKDVEDVGLAISFEKHNDVF
GFIANYQLAGTILESGSVVEALVLDVAKADKLVELTLKPEFINRSKESSTSHTNKKKRRR
EASKDLVLHQTVNAVVEIVKENYLVLSIPENDYTIGYASVSDYNAQRFPHKQYQNGQSVV
ATVMALPSPETSGRLLLLPNEVNGTSSSKRTKKKSSYKVGTLVEAEITDIKTLELKLKFG
FGLHGRIHITEVQNGSVLENPFSCYKVGQTVTARIVAKPNESDGNRKGSQWELSVRSEMV
TGSSDIDDVSENLEFKIGQCVAGYVYKVESEWIWLTISRNVRAQLYILDSAIEPSELEDF
QNRYHVGQPVSGHVLSVNMEKKLLRLVVRPFSTLPCGTSEEPHINVVDKGLTAHFHEGDI
LGGRVSKILPSVGGLLVQVGPRTYGKVHFTELADTLVPDPLSGYHEGQFVKCVVLEVSHT
VKGTIHVDLSLRSSNVKLSQDSAVNANSKCVEKIEDLHPDMIVKGYIKNVTPKGCFIMLS
RKIDAKILLSNLSEQYVQELEKEFPIGKLVIGRVISVEPLSNRVEVTLKTSTDPNIPKSE
IIDLSKFHVGDVISGRIKRVESFGLFIAIDNTNMVGLCHVSEISDNRIENIEANYRAGER
VNARILKVDEERHRISLGMKNSYMRDETMLQIPSEEESDEPITDGMKSITSMNSSLLGTS
NIDVEDEINQFPILSQVQQRADIPPLDVPLDDFDQFDVNNTNSQSEEHANEEDIVNEKHK
RREKKKAKEEREKQIRAAEERLLEDDVPRTADEFEKLIRSSPNSSFTWIKYMDFMVSMVD
VEKARSIAERALRTINIREENEKLNIWKAYFNLENKYGNPREEAVMKVFQRALQYNDPKK
VYLALLGMYERTEQHNLADELLNKMTKKFKHSCKVWLRRIQSLLKQNQDGIQPVIDRASL
SLPKHKHIKFFSQTAILEFKVGVLDRGRSMFEKILREYPKRTDLWSVYLDQEIQHKDKDI
IRALFERAVSLSLPPKKMKFLFKKYLYYEKSQGDEERIESVKRKAMEYVESTRA
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcattctaaaaaaccgcagaagaagaagaagaagaacgactctgtagacaag
ccgaaaatcgataaagcctctaagaaaatattcaaaccaaagaagagggaacaaaatgac
gccgtcgtcgcagctaagtccgaagcactctctctgcagctagaagacgaggttcccgat
tttcctcgaggcggagaattttccgcgaagggaaggagtgattacgacgagtttagcgcc
gaggatccctcgaggaagacgaggaagaagaagaaggggagaagtgcgtcgagtaagagt
aatgaaggcgcagatgactggggctcgctttctggcgacggcatcaccggaaaattgccg
cggcgtgtgaatagaattactctcaagaatataactcctggaatgaagctttggggagtt
gttgctgaagtaaatgagaaagaccttgtagttagtttaccagggggtttacgtggttta
gttcatgcttcagatgcagtggatcctatttttgatgacaaaattgaggttggggaaatt
ttcctttctggtgtattttgtgttgggcagctggtttcttgtgttgtactgagattggat
gatgacaagaaagagaaaggaagcaggaaaatttggctttctttgcgtctttctttgtta
cacaagaactacaacttggatgttgttcaggaaggcatggtccttgctgcatatgtgaag
agtattgaagatcatggttacattcttcattttggtttaccttctttcttggggttctta
ccaaaaaacagctctgcagaaggttggggtggtgaagtaaaaattgggaaacttctgcag
ggtttggttagaaccattgataaagttcgtaaagtggtttacttgagttctgaccctgat
acaatgtccaaaagtgtgaccaaggatcttagaggtttatcaattgatcttctagttcca
ggaatgctggtaaatgcccgtgtgaagtcaatccttgagaatggtgttatgttatcattt
ctcacatacttcactggaactgttgatctgtttcatttgcaaaatatttatcctggaaca
aactggaaggataagtgcagtgaatctcagaaggttgtttctcggatattattcattgat
ccatcaagtagagctgttgggttgacgctgaatccacatcttgttcagaacagggccccc
ccttctcatgttaaaattggagatatatatgacaactcaaaagttgttagggtggataga
ggattaggactattgcttgaagttccatcaattccggagccaactccagcttttgtcagt
atatctgatattgctgaagaggaggtccaaaaacttgagaagaagtacaaggaaggaaat
cgtgttcgagttcggattcttgggttacgatatttggaaggaattgctacaggagttttg
aaggctagtgctttagaagaggaagtgtttactcattctgatgtcaagcctggcatggtg
gtgaaggctaagattctttcagttgacagctttggtgctatagtgcaaattccaggtggt
gtgaaggcactttgtcctcttcgacatatgtctgaattggaaatttcaaagcctggaaaa
aaatttaaggtgggagctgaattggttttccgtgtgcttggttgcaagtcaaaaagagtg
acagttacacacaagaaaacgcttgtgaaatcaaaacttgggattattagttcatatgct
gatgcaactgatggtttgataacccatggatggataacaaagattgaagttcatggatgc
tttgtacggttttacaatggggtccaaggatttgctcccagatctgagcttggattagag
ccaggggctgatccaggtacagtgtacaatgttggacaagttgtcaaatgccgggtcata
agttgcattcctgcttcacgaagaatcaatcttagtttcataataaagcccacaagggtt
tctgaagatgatatggttacgctgggtagccttgtttcaggagttgttgacagaataaca
tctaatgctgtagttgtttatgtcaatgcaagtggtttctcaaggggtacaatatctatg
gagcacttggcagatcatcatgggcaagctattttgatgcactcaagattgaaacctgga
tataattttgaccaactgctggttctagatgttaagggaaacaatttgatcctgtctgcc
aaaagttctcttattaaacatgctcagcagattcctgcagatatcaatcagatacatcct
aactccgttgtgcatggctatatatgtaacttaattgagtctggttgctttgttcgtttc
cttggtcatttaactggctttgctcctagaaataaggctgcagatgaccagaaaagcaat
attttggaagcttattacattggacaatcagttcgcagcaacatatccaatgttagtagt
gaaactggtagagtaacactctcgctaaagcagactgcttgttcttcaactgatgcatca
tttattcaggactactttctcatggatgacaagattgcaaagttgcaatactggggatct
ggtgcatctgattcaaagtgggatgaaggatttaacattggtatggttgcaaaagggaaa
gttaaggatgttgaggatgttggacttgctataagttttgaaaagcataatgatgttttt
ggttttattgccaattatcagttggctggaactattttggagagtggctctgtagtggaa
gcattggttcttgatgttgcaaaggcagacaagcttgttgagttaactctaaaaccagag
ttcattaatagatctaaagaaagttccacaagtcataccaacaagaagaaacgtcgaaga
gaggcatcgaaggacttggtattgcatcagactgtgaatgcagtagtggaaattgtaaaa
gaaaattacctggttctatcaattccagaaaatgattacactataggatatgcatcagta
tcggactataatgctcaaaggtttcctcataaacaataccaaaatgggcagagtgttgtt
gcaactgttatggctcttccaagtcctgaaacatcaggaaggttgctcttacttcccaat
gaggtcaatgggacatctagttctaaaagaaccaagaagaagtctagctacaaagtggga
actctggttgaggcagagattactgacatcaaaacgcttgaactgaagttgaagtttgga
tttggtctacatggccggattcacataacagaggtacagaatggaagtgttttggaaaat
ccattctcttgttacaaagttgggcaaacagtgacagcaaggattgttgcaaaacctaat
gagtcagatggcaatcggaagggctcacagtgggagctatcagtcagatctgaaatggtt
acaggttccagtgatatagatgatgtatctgaaaatcttgagtttaaaattgggcaatgc
gtggctggttatgtatataaagtagaaagtgaatggatctggttaacaatatcgcgaaat
gtaagggctcagctatatattcttgatagtgctattgaacccagtgagcttgaggatttc
cagaatcgatatcatgttggacaacctgtttctggccatgttctaagtgtcaacatggag
aagaagctattacggttggttgtgcgccccttttctactcttccttgcggaactagtgaa
gagccacacattaatgttgtggataagggtttaacagcacattttcatgaaggagatatt
ttaggtggaagggttagtaaaatacttccaagtgttggtggattgcttgtccaagttggt
cctcgcacatatggaaaagtacattttactgaacttgcagacacattggtgcctgatccg
ttgtctggatatcatgaagggcagtttgtcaaatgtgtagtgcttgaagtcagccacact
gtcaagggtactattcatgttgacttgtcattgcgatcttccaatgtgaagctttcccag
gattctgccgtgaatgctaacagcaaatgtgtggagaagattgaggatcttcatcctgat
atgattgtaaagggttatattaagaatgtcacaccaaaaggttgcttcattatgctgtca
cgaaagattgatgccaaaattcttctgtccaatctttccgaacaatatgttcaagaactt
gagaaagaatttcctattggaaaacttgtcattggcagggttatatctgtggagcctctc
tcaaatcgtgttgaagttacactgaagacgtcaacggatcccaatatacccaaatctgag
attattgatttaagtaaatttcacgttggagatgttatatctggccggattaagcgggtt
gagtcatttggtttattcattgcaattgacaacacaaacatggttgggttatgccatgta
tcagaaatttctgataaccgtattgagaacattgaagcaaactatagagctggagagaga
gtaaatgcaagaatattaaaggtggatgaagaaagacacagaatttctttgggaatgaag
aattcatatatgagggatgaaaccatgcttcaaataccatctgaggaagaatcagatgaa
cctatcacagatggaatgaagtctataacttctatgaatagtagtttgcttggaacctca
aatatagatgttgaggatgaaattaatcaattcccaattctttcacaagtacaacaaagg
gcagacattccaccacttgatgttccccttgatgactttgatcaatttgatgtaaataac
actaacagtcaaagtgaagaacatgcaaatgaagaagacattgtaaatgaaaaacataag
agacgtgaaaagaagaaagcaaaggaggagagggagaagcaaataagggctgctgaggaa
agattactggaggatgatgtccctagaactgctgatgagtttgaaaagctgattagaagc
tctcctaatagcagtttcacctggataaaatatatggatttcatggtttctatggttgat
gttgagaaagcccgctcaattgccgaaagggctttgaggacaataaatatccgagaagag
aatgagaagcttaacatctggaaggcctactttaatttggaaaataagtatggaaaccct
agagaggaggctgttatgaaagtattccaaagagctctacagtacaatgatcccaaaaag
gtctacctagcactcttgggaatgtatgagaggactgaacagcataatttagccgatgaa
cttctcaataaaatgacaaagaagttcaagcattcatgcaaagtttggttgaggcgtata
caaagtcttttgaagcaaaaccaggatggaatccaacctgtcattgatcgagcttcgtta
agccttcccaaacacaagcatattaaatttttctctcagacagctattcttgaattcaaa
gttggggttctagatcgagggcgatccatgtttgaaaaaatcctacgggagtacccaaag
agaacagacttatggagtgtttatcttgatcaagaaattcaacataaagacaaagatata
attcgtgcactgtttgaaagggctgttagtctgagcctcccaccgaaaaagatgaagttc
ttattcaaaaagtatctttattatgagaagtcccaaggtgatgaagaacggattgaatct
gtgaagaggaaagcaatggaatatgtcgagagtactagggcttga
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